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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • MS4A1
EVOLUTIONARY SPLEEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Bone marrow & Lymphoid tissues
Evolutionary methods
SPLEEN - Expression summary
Protein expression
Spleeni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in red pulp: Medium
Cells in white pulp: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:247.4 nTPM
HPA:239.1 nTPM
GTEx:247.4 nTPM
FANTOM5:511.0 Scaled Tags Per Million
Macaque:330.0 nTPM
Mouse:246.8 nTPM
Rat:188.9 nTPM
Pig:43.8 nTPM
SPLEEN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPLEEN - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA014341Antibody HPA014391Antibody CAB000015
Cells in red pulp MediumLowMedium
Cells in white pulp HighHighHigh







SPLEEN - PROTEINTALKS DB MS
Median intensity 13518
Sample Intensity
Spleen_01
15982
Spleen_02
13518
Spleen_03
6040

SPLEEN - MANN MS
Median intensity 30318169
Replicate Intensity
Spleen_01
25982591
Spleen_02
32447631
Spleen_03
30318169

SPLEEN - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

239.1
overview
Female, age 60
Spleen sample 236
nTPM: 263.4
Cell types%
Lymphocytes:
40

Macrophages:
30

Endothelial cells:
15

Fibroblasts:
5

Other cell types:
10

overview
Male, age 17
Spleen sample 237
nTPM: 210.8
Cell types%
Lymphocytes:
40

Macrophages:
35

Endothelial cells:
15

Fibroblasts:
5

Other cell types:
5

overview
Male, age 20
Spleen sample 238
nTPM: 222.4
Cell types%
Lymphocytes:
40

Macrophages:
30

Endothelial cells:
15

Fibroblasts:
5

Other cell types:
10

overview
Female, age 19
Spleen sample 239
nTPM: 218.4
Cell types%
Lymphocytes:
40

Macrophages:
30

Endothelial cells:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 65
Spleen sample 378
nTPM: 280.6
Cell types%
Lymphocytes:
35

Macrophages:
30

Endothelial cells:
20

Fibroblasts:
10

Other cell types:
5


SPLEEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

247.4
GTEx sample id Sample description nTPM
Spleen
Average nTPM: 247.4
Samples: 277

Max nTPM: 1250.1
Min nTPM: 16.5
Std nTPM: 152.2
Median nTPM: 221.2
GTEX-16MT8-1826-SM-7EWE8 60-69 years, female 1250.1
GTEX-18A6Q-2126-SM-HAV3C 60-69 years, male 1051.6
GTEX-1LSVX-1426-SM-DHXJO 60-69 years, male 859.4
GTEX-15DYW-1426-SM-6LPIW 60-69 years, female 781.8
GTEX-17HII-2326-SM-GRR1X 50-59 years, male 726.7
GTEX-12WSD-1726-SM-5GCN4 60-69 years, female 690.9
GTEX-ZDYS-1026-SM-4WKHC 50-59 years, male 680.0
GTEX-1NUQO-0426-SM-HK79G 20-29 years, female 627.9
GTEX-1JMLX-1426-SM-CNNPO 50-59 years, male 606.3
GTEX-1PIIG-1226-SM-EXOIQ 30-39 years, male 577.8
GTEX-14PJO-2026-SM-GOQYV 60-69 years, male 568.4
GTEX-1GF9U-0126-SM-AHZ4G 40-49 years, female 535.1
GTEX-1MJIX-0126-SM-HL9SS 40-49 years, male 512.2
GTEX-14PK6-0526-SM-69LOF 70-79 years, female 499.5
GTEX-1LNCM-0426-SM-DHXK6 50-59 years, female 497.4
GTEX-1R7EV-0126-SM-EAZ3O 40-49 years, male 496.4
GTEX-13FH7-1326-SM-5IFG8 50-59 years, female 495.4
GTEX-1K9T9-0626-SM-CXZKY 50-59 years, female 488.5
GTEX-18A7A-1626-SM-HAV37 50-59 years, female 485.5
GTEX-14PJ6-0226-SM-6AJ9K 60-69 years, female 461.4
GTEX-Q2AH-0226-SM-48U1I 40-49 years, male 459.9
GTEX-Y5LM-0326-SM-4VBRN 40-49 years, female 459.0
GTEX-1PWST-1626-SM-EXOIU 70-79 years, male 451.6
GTEX-1KAFJ-1026-SM-D4P2Z 50-59 years, male 448.8
GTEX-146FR-1926-SM-5NQA6 60-69 years, female 441.9
GTEX-XMK1-0126-SM-4B65F 40-49 years, male 432.8
GTEX-1211K-0426-SM-5FQTP 60-69 years, female 431.4
GTEX-14ICL-0126-SM-664NG 30-39 years, male 415.3
GTEX-OOBJ-0926-SM-48TDO 60-69 years, male 410.3
GTEX-11XUK-0426-SM-5EQML 40-49 years, female 407.9
GTEX-1RAZR-1626-SM-EAZ4V 40-49 years, male 402.0
GTEX-1AMFI-0926-SM-731E4 50-59 years, female 393.5
GTEX-WYVS-0126-SM-4ONDH 40-49 years, female 386.1
GTEX-1QAET-2326-SM-EXOJ1 50-59 years, male 385.1
GTEX-11VI4-0126-SM-5GU6Z 40-49 years, female 381.5
GTEX-1J8QM-0926-SM-C1YQ9 60-69 years, female 377.6
GTEX-ZP4G-0326-SM-4YCEF 20-29 years, female 374.8
GTEX-1H3O1-1126-SM-9WPO9 60-69 years, male 370.3
GTEX-1J8Q3-0126-SM-C1YSI 60-69 years, male 370.1
GTEX-147F3-0126-SM-5NQBJ 50-59 years, female 368.6
GTEX-1LG7Z-0126-SM-EV79V 30-39 years, male 358.8
GTEX-QESD-0126-SM-EXOHG 20-29 years, male 357.8
GTEX-1IDJU-0426-SM-GA8YH 60-69 years, female 355.1
GTEX-14PN3-0226-SM-6871K 60-69 years, female 354.4
GTEX-14JG6-0226-SM-6872A 30-39 years, female 350.8
GTEX-1QMI2-1526-SM-EXOJT 60-69 years, male 348.7
GTEX-11DXX-0726-SM-5H12X 60-69 years, female 344.2
GTEX-15DCE-0126-SM-HAV2T 20-29 years, male 341.0
GTEX-13PVR-0326-SM-5RQJY 60-69 years, female 335.0
GTEX-QLQW-0126-SM-447BK 30-39 years, male 333.3
GTEX-1PPH8-1126-SM-HL9SW 20-29 years, male 331.5
GTEX-13CF3-0226-SM-5J1NW 60-69 years, female 330.3
GTEX-13N11-0126-SM-5KM2Z 50-59 years, female 329.1
GTEX-Y8LW-0126-SM-4VBS1 50-59 years, female 328.3
GTEX-1QCLZ-1026-SM-E6CR1 60-69 years, female 324.4
GTEX-1AYD5-0226-SM-79ONV 50-59 years, male 323.8
GTEX-NFK9-1426-SM-43ISG 40-49 years, male 321.2
GTEX-OIZF-0926-SM-7MKH7 60-69 years, male 312.4
GTEX-1R9K5-1126-SM-EAZ4G 50-59 years, male 311.4
GTEX-X3Y1-0126-SM-4PQZA 40-49 years, male 311.4
GTEX-14E1K-0126-SM-664NL 50-59 years, male 308.7
GTEX-ZVP2-0526-SM-51MSC 50-59 years, male 308.6
GTEX-139T6-0226-SM-5IFGZ 50-59 years, male 307.6
GTEX-XGQ4-0126-SM-4AT4H 50-59 years, male 307.6
GTEX-XXEK-0126-SM-4BRVU 50-59 years, male 306.5
GTEX-ZPU1-1026-SM-4YCEQ 40-49 years, male 301.2
GTEX-17F9E-1126-SM-79OMO 50-59 years, male 297.7
GTEX-1F5PK-0726-SM-7MGXN 50-59 years, male 296.9
GTEX-11NSD-0426-SM-5N9CR 20-29 years, male 295.9
GTEX-1LGRB-0126-SM-CNNR6 50-59 years, female 294.1
GTEX-1122O-0526-SM-5N9DM 60-69 years, female 292.8
GTEX-14PJ5-0326-SM-664OD 60-69 years, female 292.0
GTEX-11P7K-0426-SM-5BC5H 30-39 years, male 290.2
GTEX-12WSK-0126-SM-5GCO7 40-49 years, female 289.0
GTEX-WYJK-0726-SM-G8W7Z 50-59 years, male 287.3
GTEX-1CB4I-1426-SM-79OLZ 50-59 years, male 286.5
GTEX-X4LF-0226-SM-4QAS8 50-59 years, male 281.4
GTEX-1I1GT-0226-SM-GA8ZH 60-69 years, female 280.6
GTEX-1N2DV-0726-SM-HK7AD 40-49 years, male 280.5
GTEX-1RB15-0126-SM-G9ERT 60-69 years, male 278.8
GTEX-1QCLY-0126-SM-DPRZV 30-39 years, male 278.6
GTEX-OHPL-0926-SM-G9ER4 60-69 years, female 278.4
GTEX-15UF7-1926-SM-6LPJT 40-49 years, male 277.9
GTEX-1C6VQ-2126-SM-7IGNL 50-59 years, male 277.3
GTEX-Y5V5-1126-SM-EVYAR 60-69 years, female 277.1
GTEX-W5X1-0326-SM-HAUYG 40-49 years, female 276.9
GTEX-1MJK3-0126-SM-DPRYY 20-29 years, male 275.1
GTEX-W5WG-0626-SM-4SOID 50-59 years, female 273.8
GTEX-ZPCL-0626-SM-DNZZ6 60-69 years, female 272.3
GTEX-XAJ8-0126-SM-47JYG 40-49 years, male 271.3
GTEX-O5YV-0826-SM-HM8V9 60-69 years, female 268.5
GTEX-1RNTQ-1026-SM-EV7B4 20-29 years, female 268.3
GTEX-1S831-0726-SM-EV79O 20-29 years, male 263.3
GTEX-QV31-0126-SM-447BP 30-39 years, male 261.5
GTEX-1JMQK-1126-SM-CXZJW 60-69 years, male 261.4
GTEX-1B8KZ-0226-SM-7EWF6 50-59 years, male 258.0
GTEX-18A66-1826-SM-7KFSU 60-69 years, male 257.8
GTEX-12WSG-0926-SM-5EGIH 50-59 years, female 257.3
GTEX-16A39-0126-SM-H7OFU 30-39 years, female 256.1
GTEX-1H3VY-1526-SM-9WG7S 50-59 years, male 255.0
GTEX-17HHE-0326-SM-793BH 50-59 years, male 254.4
GTEX-ZPIC-0126-SM-DNZZ9 40-49 years, female 254.2
GTEX-QCQG-0226-SM-48U28 50-59 years, female 253.6
GTEX-ZLWG-0426-SM-4WWFA 50-59 years, female 251.8
GTEX-14PKU-0526-SM-6871A 40-49 years, female 251.6
GTEX-15ER7-1526-SM-6LLHO 20-29 years, female 251.4
GTEX-15ETS-3126-SM-6LPKN 40-49 years, female 250.1
GTEX-1B97I-0126-SM-731DH 40-49 years, male 248.8
GTEX-12BJ1-0726-SM-5EGGF 60-69 years, male 248.3
GTEX-1MUQO-1326-SM-EV7AE 60-69 years, male 247.1
GTEX-1399R-0226-SM-5IJGG 30-39 years, male 246.7
GTEX-PX3G-0926-SM-48U12 20-29 years, female 246.7
GTEX-1KXAM-0126-SM-HL9S2 60-69 years, male 245.3
GTEX-1PDJ9-0226-SM-DPRYX 20-29 years, male 244.4
GTEX-144GN-2126-SM-5O99D 50-59 years, male 243.0
GTEX-1JKYN-0326-SM-AHZ4D 30-39 years, male 242.7
GTEX-13U4I-1626-SM-5IFFR 40-49 years, female 239.9
GTEX-1R7EU-2026-SM-E9U63 60-69 years, male 239.7
GTEX-1C475-1126-SM-7MGY7 40-49 years, female 239.5
GTEX-1RMOY-0726-SM-EV79D 50-59 years, male 239.3
GTEX-1A3MV-0126-SM-731FQ 30-39 years, male 238.7
GTEX-1R9PM-0126-SM-DPRY6 20-29 years, male 236.0
GTEX-YEC4-0126-SM-4W21T 40-49 years, male 235.8
GTEX-13111-0126-SM-5EGHO 50-59 years, male 234.9
GTEX-1QP2A-2526-SM-EXOJB 50-59 years, male 234.2
GTEX-1CB4E-0126-SM-7DHMX 60-69 years, male 231.5
GTEX-11P81-1326-SM-5GU5S 30-39 years, female 231.4
GTEX-1C4CL-0626-SM-731DM 30-39 years, male 230.5
GTEX-15SHV-0126-SM-6LPIS 60-69 years, male 230.0
GTEX-WHWD-0126-SM-4M9Q5 50-59 years, male 229.0
GTEX-14DAR-0326-SM-5S2PS 50-59 years, male 228.5
GTEX-1JKYR-1126-SM-CGQGJ 20-29 years, male 228.4
GTEX-R55G-0226-SM-48FEI 40-49 years, female 227.5
GTEX-XYKS-0126-SM-HL9TA 60-69 years, female 226.6
GTEX-1H1E6-0226-SM-GA8YV 30-39 years, male 222.4
GTEX-ZEX8-0726-SM-4WKH8 50-59 years, male 222.2
GTEX-ZVZP-0726-SM-59HKA 50-59 years, male 221.9
GTEX-1HCU9-0126-SM-9WG7M 20-29 years, male 221.4
GTEX-XQ8I-1726-SM-4BOQB 50-59 years, male 221.2
GTEX-ZF2S-0326-SM-4WKGD 50-59 years, female 219.8
GTEX-U3ZH-0126-SM-4DXUK 30-39 years, male 219.0
GTEX-1MCYP-0226-SM-EV7A3 20-29 years, female 218.1
GTEX-ZLFU-0526-SM-4WWBN 40-49 years, male 217.9
GTEX-WFON-0126-SM-4LVM9 40-49 years, male 217.5
GTEX-11LCK-0126-SM-5A5M5 30-39 years, male 217.3
GTEX-1S82Z-0126-SM-F2I21 30-39 years, female 215.9
GTEX-QV44-0126-SM-CJI1X 50-59 years, male 214.4
GTEX-1F5PL-2226-SM-7MKHE 40-49 years, female 211.8
GTEX-15RJ7-0126-SM-6LPJN 40-49 years, male 210.9
GTEX-Y114-0726-SM-4TT6U 50-59 years, female 210.2
GTEX-18A67-1526-SM-7LG6F 50-59 years, male 207.6
GTEX-1HSMQ-0126-SM-D4P2I 50-59 years, male 206.9
GTEX-1MGNQ-1126-SM-EAZ4Y 40-49 years, male 206.5
GTEX-QDT8-1526-SM-EXOHP 30-39 years, female 204.6
GTEX-131XE-1126-SM-5EGHW 50-59 years, male 203.7
GTEX-YFCO-0926-SM-5LUA5 40-49 years, male 203.4
GTEX-1IDJD-0726-SM-GA916 30-39 years, male 202.9
GTEX-14XAO-0126-SM-HAV2B 60-69 years, female 202.5
GTEX-ZLV1-0326-SM-HL9UA 60-69 years, female 201.8
GTEX-1JMPZ-0926-SM-CXZJR 30-39 years, male 200.2
GTEX-111CU-0426-SM-5GZY1 50-59 years, male 198.9
GTEX-Z9EW-0726-SM-5HL9H 40-49 years, male 198.6
GTEX-1NHNU-0226-SM-HK79X 50-59 years, male 198.1
GTEX-1QW4Y-0126-SM-DPRZQ 30-39 years, male 197.6
GTEX-T5JW-0126-SM-4DM6K 20-29 years, female 196.0
GTEX-1RAZQ-0126-SM-EV7B1 30-39 years, male 195.5
GTEX-1B97J-1926-SM-7IGQB 50-59 years, female 192.1
GTEX-QDVN-0526-SM-48TZ4 50-59 years, male 192.1
GTEX-WXYG-0126-SM-4OND7 50-59 years, female 192.0
GTEX-1LVAN-1026-SM-CNNQZ 50-59 years, female 191.9
GTEX-14E6E-1226-SM-5S2R5 30-39 years, male 191.4
GTEX-ZV6S-0826-SM-5NQ6Z 40-49 years, female 191.2
GTEX-P4QT-0926-SM-EZ6KQ 50-59 years, female 188.2
GTEX-15SB6-0126-SM-6LPJR 50-59 years, female 187.9
GTEX-YB5K-1926-SM-4VDT4 40-49 years, female 186.8
GTEX-QMRM-0226-SM-CL55S 50-59 years, male 184.8
GTEX-13X6H-0726-SM-5Q5BX 50-59 years, female 183.7
GTEX-117YX-2126-SM-5GIEL 50-59 years, male 181.3
GTEX-1GZ4H-0126-SM-9JGGI 50-59 years, female 179.0
GTEX-UJHI-0126-SM-4IHLP 50-59 years, female 178.6
GTEX-1F75I-0226-SM-7MKHQ 40-49 years, male 177.9
GTEX-111FC-1326-SM-5N9D9 60-69 years, male 177.8
GTEX-1PPH7-0126-SM-E6CPB 40-49 years, male 177.8
GTEX-1JK1U-0126-SM-C1YQY 60-69 years, male 174.9
GTEX-1IDJE-0126-SM-C1YQ6 50-59 years, female 174.3
GTEX-132QS-0226-SM-5IFFZ 60-69 years, male 172.5
GTEX-16AAH-0126-SM-HAV23 50-59 years, male 170.2
GTEX-1QP29-0126-SM-EAZ3S 50-59 years, male 169.3
GTEX-1399S-0226-SM-5IFFG 30-39 years, female 169.0
GTEX-ZYFG-0726-SM-5GIDX 60-69 years, female 168.7
GTEX-UPK5-1626-SM-4JBHI 40-49 years, male 167.0
GTEX-ZTTD-1726-SM-57WEL 50-59 years, male 166.7
GTEX-146FQ-0626-SM-5LU9U 30-39 years, male 166.5
GTEX-15CHC-0726-SM-6AJ9D 60-69 years, female 166.4
GTEX-VJYA-0126-SM-4KL1P 60-69 years, male 164.3
GTEX-13VXT-1326-SM-5LU3Y 20-29 years, female 163.9
GTEX-1CB4F-0226-SM-7EPHS 60-69 years, male 163.1
GTEX-P4PP-0926-SM-48TBZ 30-39 years, female 162.7
GTEX-ZDTT-1026-SM-5KM19 60-69 years, male 158.2
GTEX-17GQL-0126-SM-72D5Q 60-69 years, male 157.1
GTEX-12WSJ-0526-SM-5GCOZ 40-49 years, female 154.9
GTEX-R55C-0126-SM-48FEQ 40-49 years, male 154.7
GTEX-1MCC2-0826-SM-EV7AM 30-39 years, female 150.8
GTEX-1KD5A-1526-SM-D4P3W 50-59 years, male 150.6
GTEX-1IDJC-0126-SM-C1YQC 50-59 years, male 148.7
GTEX-15RIG-0126-SM-6PAN4 40-49 years, male 147.3
GTEX-1KANA-1226-SM-DHXKE 20-29 years, male 146.6
GTEX-1QP66-0126-SM-EAZ3N 50-59 years, male 146.6
GTEX-11EQ9-0426-SM-5A5JY 30-39 years, male 146.1
GTEX-1C64O-1626-SM-731EN 60-69 years, male 143.0
GTEX-1N2EF-1526-SM-EXOIY 60-69 years, male 142.8
GTEX-Y3IK-0126-SM-4WWE9 50-59 years, female 139.2
GTEX-U3ZN-0126-SM-4DXUM 30-39 years, female 138.8
GTEX-ZAB5-0526-SM-5CVMU 50-59 years, male 138.3
GTEX-1R9JW-0126-SM-EAZ4P 30-39 years, female 133.3
GTEX-13PL7-1126-SM-5MR5O 60-69 years, female 133.0
GTEX-14BMU-0426-SM-5P9FI 20-29 years, female 132.5
GTEX-ZF29-0626-SM-4WKHD 60-69 years, female 132.3
GTEX-1OFPY-0126-SM-EXOJ3 60-69 years, male 131.8
GTEX-U4B1-0526-SM-4DXTK 40-49 years, male 131.7
GTEX-1K2DA-0126-SM-CGQGV 50-59 years, male 130.1
GTEX-Y3I4-0126-SM-4TT26 50-59 years, male 129.9
GTEX-P78B-1226-SM-EZ6KP 40-49 years, female 129.6
GTEX-OIZH-0926-SM-48TBR 50-59 years, male 129.3
GTEX-O5YW-0926-SM-HK7A1 50-59 years, male 128.7
GTEX-X585-1826-SM-4QAS3 50-59 years, male 127.9
GTEX-1S82P-1326-SM-HL9SA 60-69 years, female 127.4
GTEX-15DZA-0126-SM-6PAMV 30-39 years, female 126.8
GTEX-16XZY-0126-SM-7IGQ9 70-79 years, male 124.4
GTEX-17F97-1626-SM-72D6W 50-59 years, male 123.7
GTEX-1HCU7-1426-SM-CNNQK 50-59 years, male 123.6
GTEX-RUSQ-0126-SM-47JWV 50-59 years, male 123.2
GTEX-1IDJF-1526-SM-GA8ZR 20-29 years, male 121.9
GTEX-POMQ-0126-SM-48TD6 20-29 years, female 121.3
GTEX-169BO-0126-SM-79OLS 50-59 years, male 119.4
GTEX-1L5NE-0926-SM-D4P3P 50-59 years, male 119.4
GTEX-XPVG-0626-SM-4B65B 50-59 years, male 118.0
GTEX-13S86-0126-SM-5S2PI 40-49 years, male 115.9
GTEX-15G1A-0226-SM-H7OFT 30-39 years, male 115.7
GTEX-PW2O-0126-SM-48TC8 20-29 years, male 114.8
GTEX-18D9B-0126-SM-HAV21 60-69 years, male 114.1
GTEX-O5YT-0926-SM-48TDG 20-29 years, male 114.0
GTEX-13OVK-0426-SM-7KFT8 40-49 years, male 112.0
GTEX-17F96-1426-SM-7IGQA 70-79 years, male 111.1
GTEX-ZZPU-0126-SM-5E446 50-59 years, female 109.7
GTEX-S3XE-0626-SM-4AD6B 50-59 years, male 109.5
GTEX-139YR-0426-SM-5IFFV 50-59 years, male 107.8
GTEX-1M5QR-0126-SM-F2I23 40-49 years, male 107.0
GTEX-S4Z8-0226-SM-4AD5K 60-69 years, male 107.0
GTEX-1R9K4-1526-SM-DPRY5 60-69 years, male 103.9
GTEX-1AX9K-0226-SM-793CM 50-59 years, male 103.1
GTEX-YB5E-0426-SM-5IFHR 40-49 years, male 102.6
GTEX-14PJ4-0526-SM-6871G 60-69 years, male 102.4
GTEX-16NFA-0226-SM-HAUYF 50-59 years, male 100.4
GTEX-PLZ6-0126-SM-48TC6 30-39 years, male 99.6
GTEX-ZTPG-2126-SM-H6Q6N 20-29 years, female 97.4
GTEX-17F98-0126-SM-7MGW3 40-49 years, female 97.3
GTEX-131XG-0426-SM-5IFGD 50-59 years, female 97.1
GTEX-15F5U-0126-SM-6LPKA 40-49 years, male 94.6
GTEX-S4Q7-0126-SM-4AD5P 20-29 years, male 94.6
GTEX-14PJ3-0326-SM-GPI94 50-59 years, male 93.8
GTEX-1LSNM-0126-SM-EAZ57 50-59 years, male 93.3
GTEX-WY7C-0126-SM-4ONCO 50-59 years, male 90.9
GTEX-1RAZA-1026-SM-E6CQ9 20-29 years, male 90.7
GTEX-XV7Q-0126-SM-4BRVK 40-49 years, female 86.4
GTEX-15CHQ-1226-SM-6ETZL 60-69 years, male 85.5
GTEX-15SDE-0126-SM-793BA 50-59 years, female 84.4
GTEX-P4QS-0926-SM-48TBS 60-69 years, male 80.5
GTEX-ZG7Y-2026-SM-DO91N 50-59 years, male 77.7
GTEX-P4PQ-0926-SM-E9U4D 60-69 years, male 76.5
GTEX-15RIF-0526-SM-6LLI2 20-29 years, male 69.5
GTEX-12WSN-0126-SM-5DUX5 40-49 years, male 68.6
GTEX-1FIGZ-0126-SM-7MKGZ 40-49 years, male 66.2
GTEX-145MN-0126-SM-5RQHY 30-39 years, male 55.5
GTEX-16MT9-1726-SM-6M47P 60-69 years, female 55.1
GTEX-15RIE-1626-SM-HAUZ7 60-69 years, male 49.3
GTEX-Q734-0226-SM-48U1A 40-49 years, female 16.5
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SPLEEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

511.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spleen
Scaled Tags Per Million: 511.0
FF:10025-101D7 39,50,70 years, male 511.0

SPLEEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

330.0
Macaque sample Sample description nTPM
Spleen
nTPM: 330.0
Samples: 3

Max nTPM: 403.1
Min nTPM: 249.0
Sample A 337.8
Sample B 249.0
Sample D 403.1

SPLEEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.8
Pig sample Sample description nTPM
Spleen
nTPM: 43.8
Samples: 4

Max nTPM: 63.4
Min nTPM: 4.9
Sample A Female 63.4
Sample B Female 4.9
Sample C Male 45.2
Sample D Male 61.6

SPLEEN - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

246.8
Mouse sample Sample description nTPM
Spleen
nTPM: 246.8
Samples: 4

Max nTPM: 277.2
Min nTPM: 220.8
Sample C 257.1
Sample D 277.2
Sample A 220.8
Sample B 232.2

SPLEEN - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

188.9
Rat sample Sample description nTPM
Spleen
nTPM: 188.9
Samples: 4

Max nTPM: 205.4
Min nTPM: 160.0
Sample A 200.9
Sample A 205.4
Sample A 189.3
Sample A 160.0

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