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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • SST
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:97.0 nTPM
GTEx:279.2 nTPM
FANTOM5:474.8 Scaled Tags Per Million
Macaque:71.4 nTPM
Pig:205.2 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.0
Sample id Sample description nTPM
Putamen
nTPM: 97.0
1937 Female, age 91, right hemisphere 168.1
1838 Male, age 80, right hemisphere 166.1
2482 Female, age 94, left hemisphere 103.6
2466 Female, age 79, unknown 87.2
1829 Male, age 74, unknown 66.5
2489 Female, age 72, unknown 48.7
2647 Male, age 75, left hemisphere 39.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

279.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 279.2
Samples: 254

Max nTPM: 1157.8
Min nTPM: 2.4
Std nTPM: 191.3
Median nTPM: 273.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1157.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 808.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 772.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 733.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 706.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 691.6
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 678.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 662.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 616.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 583.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 582.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 580.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 573.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 570.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 566.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 558.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 554.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 554.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 553.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 553.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 547.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 543.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 539.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 537.9
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 535.5
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 534.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 528.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 526.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 524.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 520.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 517.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 512.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 511.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 511.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 509.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 508.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 501.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 500.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 496.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 495.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 489.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 486.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 477.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 472.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 468.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 463.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 461.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 456.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 456.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 456.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 453.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 447.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 444.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 441.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 439.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 438.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 437.3
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 430.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 427.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 425.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 419.4
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 419.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 412.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 409.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 407.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 404.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 397.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 386.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 384.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 381.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 380.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 380.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 379.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 375.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 373.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 372.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 371.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 370.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 369.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 369.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 364.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 363.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 361.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 358.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 358.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 355.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 351.2
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 350.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 347.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 346.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 344.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 343.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 338.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 332.9
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 332.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 331.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 331.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 327.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 323.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 319.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 319.8
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 319.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 317.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 316.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 314.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 311.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 306.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 305.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 301.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 299.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 298.0
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 294.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 290.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 290.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 289.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 287.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 287.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 286.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 281.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 280.6
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 280.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 279.0
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 278.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 277.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 277.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 274.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 274.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 272.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 272.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 271.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 270.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 269.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 269.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 268.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 268.1
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 267.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 265.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 262.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 257.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 252.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 251.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 248.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 241.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 241.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 239.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 239.0
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 237.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 236.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 228.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 224.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 223.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 216.5
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 215.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 214.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 212.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 212.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 210.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 202.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 201.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 194.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 192.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 189.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 188.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 186.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 183.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 173.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 171.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 171.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 166.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 164.4
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 163.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 161.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 157.0
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 155.2
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 152.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 152.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 152.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 150.6
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 146.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 144.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 142.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 142.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 139.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 138.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 133.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 130.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 129.9
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 129.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 128.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 128.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 126.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 121.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 114.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 111.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 105.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 102.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 99.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 97.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 94.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 92.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 92.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 92.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 91.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 88.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 85.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 83.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 80.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 80.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 77.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 75.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 72.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 71.9
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 68.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 68.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 68.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 65.4
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 60.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 60.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 57.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 49.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 47.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 46.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 44.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 40.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 31.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 28.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 27.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 24.4
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 21.1
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 20.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 20.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 18.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 18.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 18.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 17.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 16.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 16.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 16.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 15.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 14.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 14.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 14.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 13.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 11.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 10.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 9.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 8.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 7.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 5.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 5.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 5.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 4.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 4.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 2.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

474.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 474.8
FF:10176-103C5 60 years, female 474.8

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.4
Macaque sample Sample description nTPM
Putamen
nTPM: 71.4
Samples: 2

Max nTPM: 77.2
Min nTPM: 65.5
Sample A 77.2
Sample B 65.5

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

205.2
Pig sample Sample description nTPM
Putamen
nTPM: 205.2
Samples: 3

Max nTPM: 335.6
Min nTPM: 89.7
Sample B Female 89.7
Sample C Male 335.6
Sample D Male 190.4

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