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  • TISSUE

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  • ATP5MC1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:171.8 nTPM
HPA Brain:127.9 nTPM
GTEx:171.8 nTPM
Pig:61.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

127.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 70.8
2226 Male, age 75, left hemisphere 82.7
1961 Female, age 42, unknown 59.0
Dorsomedial nucleus
nTPM: 71.8
1989 Male, age 62, unknown 84.1
2041 Female, age 72, unknown 75.4
2017 Female, age 42, unknown 56.0
Lateral hypothalamic area
nTPM: 101.2
2228 Male, age 66, unknown 123.5
1791 Male, age 80, right hemisphere 113.3
2271 Male, age 75, both hemispheres 98.0
2412 Male, age 62, unknown 70.1
Mammillary body
nTPM: 127.9
1923 Female, age 72, unknown 215.2
2413 Male, age 66, unknown 112.4
1948 Female, age 72, unknown 110.5
1834 Female, age 42, unknown 107.1
1945 Male, age 80, right hemisphere 94.2
Paraventricular nucleus
nTPM: 72.6
2700 Male, age 62, unknown 72.6
Preoptic area
nTPM: 83.9
1907 Male, age 80, right hemisphere 95.7
1861 Female, age 42, unknown 85.2
2414 Female, age 72, unknown 70.8
Supraoptic nucleus
nTPM: 90.6
1894 Female, age 72, unknown 104.8
2835 Female, age 72, unknown 86.3
2043 Male, age 62, unknown 80.9
Ventromedial nucleus
nTPM: 74.6
1982 Female, age 72, unknown 87.7
1822 Female, age 42, unknown 61.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

171.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 171.8
Samples: 257

Max nTPM: 417.4
Min nTPM: 60.3
Std nTPM: 50.5
Median nTPM: 167.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 417.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 393.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 382.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 360.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 324.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 288.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 279.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 277.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 273.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 268.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 267.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 266.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 256.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 252.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 248.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 245.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 245.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 242.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 237.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 236.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 235.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 234.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 234.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 231.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 230.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 230.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 227.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 226.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 224.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 224.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 221.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 221.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 220.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 218.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 218.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 218.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 218.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 218.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 217.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 216.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 214.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 214.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 213.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 211.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 210.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 210.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 210.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 209.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 208.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 208.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 208.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 208.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 207.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 207.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 207.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 205.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 203.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 202.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 201.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 200.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 199.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 198.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 198.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 197.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 197.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 197.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 197.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 196.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 195.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 191.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 191.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 190.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 189.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 189.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 188.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 188.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 187.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 186.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 186.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 186.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 186.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 185.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 185.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 185.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 185.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 185.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 184.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 184.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 184.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 183.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 182.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 181.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 180.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 180.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 179.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 179.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 178.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 178.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 177.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 176.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 176.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 176.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 175.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 175.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 175.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 174.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 174.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 174.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 174.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 173.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 173.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 172.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 172.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 172.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 172.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 171.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 171.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 171.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 171.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 170.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 169.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 169.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 169.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 168.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 168.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 168.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 167.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 167.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 167.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 167.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 166.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 166.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 165.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 165.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 165.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 163.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 163.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 162.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 161.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 161.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 161.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 159.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 159.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 159.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 159.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 158.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 158.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 157.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 156.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 156.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 156.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 155.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 155.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 155.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 154.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 154.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 153.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 151.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 151.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 150.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 150.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 150.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 149.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 149.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 149.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 148.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 148.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 147.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 146.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 146.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 144.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 144.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 143.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 143.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 142.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 142.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 142.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 141.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 141.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 140.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 140.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 139.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 139.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 139.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 139.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 139.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 138.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 138.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 138.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 138.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 138.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 137.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 137.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 137.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 136.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 135.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 135.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 135.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 134.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 133.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 133.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 133.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 132.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 132.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 131.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 131.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 131.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 131.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 131.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 129.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 127.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 127.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 127.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 127.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 127.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 127.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 127.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 127.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 126.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 126.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 126.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 125.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 125.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 124.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 124.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 124.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 123.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 122.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 122.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 120.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 119.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 119.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 118.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 116.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 116.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 115.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 113.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 111.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 110.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 110.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 110.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 109.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 108.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 107.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 106.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 105.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 104.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 103.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 99.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 98.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 98.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 95.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 94.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 94.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 90.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 68.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 60.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 61.5
Samples: 4

Max nTPM: 74.9
Min nTPM: 44.9
Sample A Female 74.9
Sample B Female 66.7
Sample C Male 59.4
Sample D Male 44.9

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