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  • SUMMARY

  • TISSUE

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  • CTBP1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:120.3 nTPM
HPA Brain:199.2 nTPM
GTEx:120.3 nTPM
Pig:41.5 nTPM
Mouse:131.2 nTPM
Allen mouse:10.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

199.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 199.2
1961 Female, age 42, unknown 210.8
2226 Male, age 75, left hemisphere 187.6
Dorsomedial nucleus
nTPM: 183.5
2041 Female, age 72, unknown 185.5
2017 Female, age 42, unknown 183.5
1989 Male, age 62, unknown 181.3
Lateral hypothalamic area
nTPM: 174.9
1791 Male, age 80, right hemisphere 178.4
2271 Male, age 75, both hemispheres 176.7
2412 Male, age 62, unknown 176.6
2228 Male, age 66, unknown 167.9
Mammillary body
nTPM: 163.4
1923 Female, age 72, unknown 178.3
1948 Female, age 72, unknown 162.6
1945 Male, age 80, right hemisphere 160.5
2413 Male, age 66, unknown 158.1
1834 Female, age 42, unknown 157.5
Paraventricular nucleus
nTPM: 160.3
2700 Male, age 62, unknown 160.3
Preoptic area
nTPM: 174.8
1907 Male, age 80, right hemisphere 188.6
1861 Female, age 42, unknown 176.5
2414 Female, age 72, unknown 159.3
Supraoptic nucleus
nTPM: 147.9
2835 Female, age 72, unknown 161.3
2043 Male, age 62, unknown 145.3
1894 Female, age 72, unknown 137.0
Ventromedial nucleus
nTPM: 184.2
1982 Female, age 72, unknown 190.3
1822 Female, age 42, unknown 178.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 120.3
Samples: 257

Max nTPM: 179.2
Min nTPM: 63.8
Std nTPM: 21.9
Median nTPM: 121.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 179.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 171.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 171.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 170.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 166.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 162.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 162.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 161.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 158.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 157.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 157.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 156.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 152.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 152.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 152.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 151.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 151.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 150.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 149.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 149.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 149.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 148.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 147.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 147.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 147.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 147.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 147.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 146.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 145.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 145.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 145.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 144.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 144.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 143.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 143.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 142.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 142.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 142.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 142.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 142.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 141.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 141.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 140.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 140.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 140.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 140.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 140.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 140.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 139.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 138.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 138.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 138.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 138.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 138.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 137.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 137.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 137.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 137.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 137.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 137.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 136.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 136.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 136.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 136.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 136.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 136.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 136.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 135.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 135.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 135.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 135.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 134.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 134.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 134.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 134.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 134.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 133.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 133.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 133.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 132.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 132.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 132.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 131.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 131.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 131.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 131.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 130.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 130.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 130.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 130.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 130.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 130.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 130.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 129.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 129.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 129.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 129.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 129.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 128.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 128.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 128.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 128.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 128.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 128.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 127.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 127.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 127.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 127.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 127.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 127.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 126.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 126.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 126.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 126.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 126.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 126.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 126.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 125.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 125.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 124.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 124.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 124.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 123.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 123.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 123.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 122.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 122.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 122.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 121.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 121.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 120.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 120.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 120.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 120.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 120.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 120.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 119.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 119.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 119.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 119.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 118.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 118.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 118.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 118.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 118.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 118.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 118.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 117.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 116.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 116.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 116.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 115.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 115.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 115.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 115.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 115.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 115.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 114.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 114.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 114.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 114.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 113.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 113.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 113.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 113.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 113.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 113.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 112.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 112.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 112.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 111.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 111.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 111.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 110.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 110.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 109.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 109.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 109.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 109.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 107.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 107.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 107.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 107.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 107.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 107.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 106.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 106.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 105.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 105.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 104.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 104.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 104.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 104.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 104.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 103.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 103.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 103.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 102.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 101.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 100.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 100.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 99.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 99.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 99.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 99.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 99.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 98.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 98.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 98.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 98.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 97.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 97.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 97.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 96.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 96.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 96.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 95.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 95.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 94.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 93.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 93.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 93.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 93.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 93.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 93.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 93.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 93.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 92.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 92.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 91.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 90.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 90.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 90.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 90.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 89.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 88.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 87.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 87.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 87.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 87.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 86.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 85.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 84.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 83.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 82.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 81.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 80.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 79.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 79.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 77.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 76.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 75.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 75.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 73.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 71.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 67.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 63.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 41.6
Samples: 4

Max nTPM: 51.0
Min nTPM: 34.8
Sample A Female 51.0
Sample B Female 40.1
Sample C Male 40.3
Sample D Male 34.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

131.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 131.2
Samples: 4

Max nTPM: 140.0
Min nTPM: 121.4
Sample A Male 140.0
Sample B Male 137.7
Sample C Female 125.7
Sample D Female 121.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.3
69059817 Antisense, RP_050317_04_B01, Mouse strain C57BL/6J (56 days, male) 10.3

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