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S100B
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  • SUMMARY

  • TISSUE

  • BRAIN

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  • S100B
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

105.278
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:902.1 nTPM
HPA Brain:674.3 nTPM
GTEx:902.1 nTPM
Pig:1491.9 nTPM
Mouse:215.9 nTPM
Allen mouse:1.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB000073
Hypothalamus mean intensity 105.278
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 32.285
Mammillary nucleus 22.432
Periventricular hypothalamic nucleus 69.458
Supraoptic nucleus 86.705
Tuberal nucleus 59.372
Ventral tuberomammillary nucleus 32.422
Lateral preoptic area 20.978
Medial preoptic area 21.681
Suprachiasmatic nucleus 63.468
Paraventricular hypothalamic nucleus 48.911
Anterior hypothalamic area, central 56.383
Ventral medial hypothalamic nucleus 48.574
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 78.736
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 10.239
Dorsal medial hypothalamic nucleus 56.879
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

674.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 208.0
2226 Male, age 75, left hemisphere 232.7
1961 Female, age 42, unknown 183.2
Dorsomedial nucleus
nTPM: 320.3
1989 Male, age 62, unknown 374.5
2017 Female, age 42, unknown 348.7
2041 Female, age 72, unknown 237.8
Lateral hypothalamic area
nTPM: 402.7
2228 Male, age 66, unknown 474.1
2271 Male, age 75, both hemispheres 421.2
1791 Male, age 80, right hemisphere 413.7
2412 Male, age 62, unknown 301.8
Mammillary body
nTPM: 672.7
1834 Female, age 42, unknown 795.4
1945 Male, age 80, right hemisphere 765.9
1948 Female, age 72, unknown 655.8
2413 Male, age 66, unknown 608.2
1923 Female, age 72, unknown 538.3
Paraventricular nucleus
nTPM: 442.4
2700 Male, age 62, unknown 442.4
Preoptic area
nTPM: 370.5
2414 Female, age 72, unknown 533.2
1861 Female, age 42, unknown 393.5
1907 Male, age 80, right hemisphere 184.8
Supraoptic nucleus
nTPM: 674.3
1894 Female, age 72, unknown 859.0
2043 Male, age 62, unknown 817.1
2835 Female, age 72, unknown 346.8
Ventromedial nucleus
nTPM: 183.4
1982 Female, age 72, unknown 185.2
1822 Female, age 42, unknown 181.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

902.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 902.1
Samples: 257

Max nTPM: 4775.7
Min nTPM: 109.6
Std nTPM: 593.4
Median nTPM: 715.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 4775.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 3274.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 3106.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 2889.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 2730.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 2668.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 2461.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 2441.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 2282.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 2256.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 2253.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 2078.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 2059.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 2033.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 2023.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1927.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 1916.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1915.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 1883.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1774.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1759.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 1753.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 1751.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 1691.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1668.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1660.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 1642.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 1625.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1624.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1566.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 1523.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1494.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 1481.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 1461.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 1436.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1435.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 1414.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 1409.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 1402.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1382.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 1367.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 1359.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 1351.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 1319.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1318.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 1298.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 1288.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 1278.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1263.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1235.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 1234.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 1230.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 1206.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1203.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 1188.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 1178.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 1177.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 1155.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 1151.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1138.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 1134.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 1133.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 1123.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 1121.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 1107.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 1095.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 1090.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 1079.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 1064.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 1058.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 1048.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1031.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 1010.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 1008.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 1004.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 1004.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 1002.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 994.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 985.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 984.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 978.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 966.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 954.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 946.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 944.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 942.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 940.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 912.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 906.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 880.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 872.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 864.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 853.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 852.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 841.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 833.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 830.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 818.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 812.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 812.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 809.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 807.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 798.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 796.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 794.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 791.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 786.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 786.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 780.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 776.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 772.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 763.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 758.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 758.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 757.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 748.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 746.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 745.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 742.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 742.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 740.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 739.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 728.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 724.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 723.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 722.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 717.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 717.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 715.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 713.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 703.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 699.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 698.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 698.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 697.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 696.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 694.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 691.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 689.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 687.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 686.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 685.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 682.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 682.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 681.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 678.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 677.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 676.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 676.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 675.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 674.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 672.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 670.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 670.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 659.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 657.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 652.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 647.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 644.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 642.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 639.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 635.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 635.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 631.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 629.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 628.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 627.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 626.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 601.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 600.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 600.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 598.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 598.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 592.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 587.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 585.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 585.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 581.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 579.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 574.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 566.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 562.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 555.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 554.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 553.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 551.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 546.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 544.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 544.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 542.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 540.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 534.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 534.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 529.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 528.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 524.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 522.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 519.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 518.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 517.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 504.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 503.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 497.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 496.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 495.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 494.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 490.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 485.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 484.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 475.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 475.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 471.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 470.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 470.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 469.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 464.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 462.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 461.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 448.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 436.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 432.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 431.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 425.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 424.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 419.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 419.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 419.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 417.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 416.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 412.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 410.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 408.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 391.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 390.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 389.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 382.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 363.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 362.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 358.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 358.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 346.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 339.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 335.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 333.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 328.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 320.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 319.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 316.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 311.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 284.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 255.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 222.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 209.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 187.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 181.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 140.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 109.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1491.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 1491.9
Samples: 4

Max nTPM: 1947.7
Min nTPM: 984.3
Sample A Female 1947.7
Sample B Female 1500.0
Sample C Male 1535.7
Sample D Male 984.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

215.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 215.9
Samples: 4

Max nTPM: 233.6
Min nTPM: 187.1
Sample A Male 187.1
Sample B Male 233.6
Sample C Female 212.7
Sample D Female 230.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.5
79591593 Antisense, RP_071204_04_D04, Mouse strain C57BL/6J (56 days, male) 1.5
79762548 Antisense, RP_071204_04_D04, Mouse strain C57BL/6J (56 days, male) 0.5

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