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  • TISSUE

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  • LY6E
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:109.2 nTPM
HPA Brain:43.4 nTPM
GTEx:109.2 nTPM
Pig:147.5 nTPM
Mouse:126.2 nTPM
Allen mouse:11.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 36.0
2226 Male, age 75, left hemisphere 44.4
1961 Female, age 42, unknown 27.7
Dorsomedial nucleus
nTPM: 34.5
2041 Female, age 72, unknown 39.3
1989 Male, age 62, unknown 35.0
2017 Female, age 42, unknown 29.1
Lateral hypothalamic area
nTPM: 33.5
2412 Male, age 62, unknown 50.4
2271 Male, age 75, both hemispheres 28.6
1791 Male, age 80, right hemisphere 28.5
2228 Male, age 66, unknown 26.5
Mammillary body
nTPM: 29.9
2413 Male, age 66, unknown 54.0
1948 Female, age 72, unknown 26.6
1945 Male, age 80, right hemisphere 25.0
1923 Female, age 72, unknown 24.8
1834 Female, age 42, unknown 19.4
Paraventricular nucleus
nTPM: 43.4
2700 Male, age 62, unknown 43.4
Preoptic area
nTPM: 33.5
1907 Male, age 80, right hemisphere 39.4
2414 Female, age 72, unknown 35.4
1861 Female, age 42, unknown 25.7
Supraoptic nucleus
nTPM: 32.3
2835 Female, age 72, unknown 42.5
1894 Female, age 72, unknown 27.9
2043 Male, age 62, unknown 26.6
Ventromedial nucleus
nTPM: 39.7
1822 Female, age 42, unknown 43.7
1982 Female, age 72, unknown 35.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

109.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 109.2
Samples: 257

Max nTPM: 275.0
Min nTPM: 44.0
Std nTPM: 32.4
Median nTPM: 104.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 275.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 228.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 225.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 222.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 202.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 194.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 194.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 182.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 181.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 179.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 177.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 174.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 167.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 166.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 165.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 164.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 161.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 161.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 160.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 156.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 155.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 151.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 150.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 149.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 148.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 147.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 145.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 145.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 145.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 143.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 143.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 142.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 142.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 142.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 138.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 138.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 137.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 136.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 135.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 135.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 134.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 134.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 133.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 131.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 130.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 129.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 129.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 128.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 128.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 128.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 127.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 127.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 127.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 127.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 126.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 126.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 126.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 125.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 124.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 124.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 124.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 124.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 124.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 124.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 123.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 123.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 122.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 122.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 122.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 121.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 121.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 121.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 121.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 120.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 120.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 120.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 120.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 120.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 119.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 119.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 119.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 119.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 118.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 118.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 118.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 118.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 118.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 117.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 117.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 117.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 116.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 116.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 115.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 115.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 115.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 115.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 114.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 114.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 114.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 113.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 113.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 113.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 112.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 111.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 111.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 111.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 111.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 110.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 110.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 109.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 109.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 109.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 109.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 109.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 108.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 108.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 107.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 107.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 107.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 106.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 106.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 105.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 105.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 105.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 105.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 104.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 104.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 104.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 104.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 104.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 103.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 103.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 103.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 102.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 102.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 101.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 101.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 101.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 101.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 101.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 101.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 101.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 100.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 100.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 100.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 99.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 99.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 99.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 99.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 99.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 99.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 99.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 99.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 99.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 98.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 98.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 98.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 98.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 97.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 97.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 97.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 97.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 97.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 97.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 97.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 97.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 96.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 96.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 96.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 95.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 95.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 94.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 94.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 94.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 94.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 94.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 93.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 93.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 93.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 92.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 91.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 91.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 91.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 91.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 91.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 90.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 90.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 90.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 89.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 88.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 87.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 87.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 87.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 86.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 86.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 86.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 86.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 85.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 84.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 84.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 84.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 84.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 83.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 83.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 83.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 83.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 82.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 82.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 82.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 81.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 81.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 81.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 80.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 80.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 80.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 80.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 79.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 78.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 78.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 78.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 78.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 78.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 77.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 77.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 76.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 75.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 75.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 75.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 75.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 74.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 74.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 74.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 73.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 72.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 71.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 71.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 71.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 70.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 70.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 69.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 68.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 67.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 67.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 67.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 66.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 65.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 65.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 65.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 64.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 63.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 62.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 60.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 60.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 59.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 50.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 48.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 44.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

147.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 147.5
Samples: 4

Max nTPM: 206.8
Min nTPM: 119.7
Sample A Female 206.8
Sample B Female 119.7
Sample C Male 134.2
Sample D Male 129.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 126.2
Samples: 4

Max nTPM: 138.5
Min nTPM: 113.7
Sample A Male 119.8
Sample B Male 138.5
Sample C Female 132.8
Sample D Female 113.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.0
79587728 Antisense, RP_071204_02_D10, Mouse strain C57BL/6J (56 days, male) 11.8
77454976 Antisense, RP_070129_01_E08, Mouse strain C57BL/6J (56 days, male) 10.3

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