HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:123.0 nTPM
HPA Brain:0.3 nTPM
GTEx:123.0 nTPM
FANTOM5:45.9 Scaled Tags Per Million
Pig:37.3 nTPM
Mouse:210.1 nTPM
Allen mouse:7.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024688Antibody HPA024745
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 0.3
Sample id Sample description nTPM
Hippocampus
nTPM: 0.3
1898 Male, age 80, left hemisphere 0.8
2148 Female, age 91, left hemisphere 0.4
2621 Female, age 67, right hemisphere 0.4
1855 Male, age 76, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 0.1
1927 Female, age 91, both hemispheres 0.4
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 0.3
1787 Male, age 76, left hemisphere 0.7
1938 Female, age 85, left hemisphere 0.5
2764 Male, age 80, right hemisphere 0.3
2613 Female, age 94, left hemisphere 0.2
2117 Female, age 91, right hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 0.2
2045 Male, age 76, both hemispheres 0.7
2082 Female, age 91, right hemisphere 0.3
1873 Female, age 85, both hemispheres 0.0
2527 Male, age 74, both hemispheres 0.0
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 0.0
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 0.0
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2137 Male, age 80, left hemisphere 0.0
2436 Male, age 74, both hemispheres 0.0
2620 Female, age 94, left hemisphere 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 0.2
2018 Male, age 76, both hemispheres 1.4
2622 Female, age 67, right hemisphere 0.3
1850 Male, age 80, both hemispheres 0.1
1933 Female, age 85, both hemispheres 0.0
1990 Female, age 91, right hemisphere 0.0
2245 Female, age 91, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
2532 Female, age 72, left hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
2693 Female, age 94, both hemispheres 0.0
Perirhinal gyrus
nTPM: 0.3
1847 Female, age 91, left hemisphere 0.7
1841 Female, age 85, right hemisphere 0.4
1794 Male, age 80, right hemisphere 0.2
2521 Female, age 94, right hemisphere 0.0
2848 Male, age 76, right hemisphere 0.0
Subiculum
nTPM: 0.1
1901 Male, age 80, both hemispheres 0.5
1977 Female, age 85, both hemispheres 0.1
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 123.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 123.0
Samples: 255

Max nTPM: 195.4
Min nTPM: 58.1
Std nTPM: 24.1
Median nTPM: 120.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 195.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 192.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 190.1
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 186.1
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 185.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 184.9
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 184.6
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 180.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 180.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 178.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 173.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 45.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.9
FF:10169-103B7 60 years, female 49.8
FF:10153-102I9 76 years, female 42.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 37.3
Pig sample Sample description nTPM
Subiculum
nTPM: 34.3
Samples: 4

Max nTPM: 40.2
Min nTPM: 30.2
Sample A Female 40.2
Sample B Female 33.3
Sample C Male 33.3
Sample D Male 30.2
Dorsal hippocampus
nTPM: 36.6
Samples: 4

Max nTPM: 46.2
Min nTPM: 30.5
Sample A Female 46.2
Sample B Female 36.2
Sample C Male 33.3
Sample D Male 30.5
Entorhinal cortex
nTPM: 35.3
Samples: 4

Max nTPM: 36.6
Min nTPM: 32.1
Sample A Female 36.4
Sample B Female 35.9
Sample C Male 36.6
Sample D Male 32.1
Ventral hippocampus
nTPM: 37.3
Samples: 4

Max nTPM: 43.9
Min nTPM: 28.6
Sample A Female 38.6
Sample B Female 28.6
Sample C Male 43.9
Sample D Male 38.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 210.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 204.0
Samples: 4

Max nTPM: 216.1
Min nTPM: 185.7
Sample A Male 185.7
Sample B Male 206.5
Sample C Female 216.1
Sample D Female 207.6
Hippocampal formation
nTPM: 210.1
Samples: 4

Max nTPM: 232.6
Min nTPM: 183.8
Sample A Male 232.6
Sample B Male 183.8
Sample C Female 210.9
Sample D Female 213.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.7
68321662 Antisense, RP_041130_02_H03, Mouse strain C57BL/6J (56 days, male) 7.7

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