HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:128.7 nTPM
HPA Brain:174.7 nTPM
GTEx:128.7 nTPM
FANTOM5:165.0 Scaled Tags Per Million
Pig:150.1 nTPM
Mouse:309.8 nTPM
Allen mouse:28.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068843Antibody CAB004587
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 174.7
Sample id Sample description nTPM
Hippocampus
nTPM: 168.2
2529 Female, age 94, left hemisphere 232.3
1898 Male, age 80, left hemisphere 194.5
1855 Male, age 76, left hemisphere 166.8
2148 Female, age 91, left hemisphere 142.0
2621 Female, age 67, right hemisphere 137.9
1911 Female, age 85, right hemisphere 136.0
Dentate gyrus
nTPM: 167.8
2010 Male, age 76, both hemispheres 260.4
2530 Female, age 94, left hemisphere 181.2
2528 Male, age 74, both hemispheres 176.6
1927 Female, age 91, both hemispheres 139.4
2246 Female, age 85, both hemispheres 134.4
2531 Female, age 67, both hemispheres 115.0
Entorhinal gyrus
nTPM: 167.7
2117 Female, age 91, right hemisphere 206.9
2764 Male, age 80, right hemisphere 203.3
1787 Male, age 76, left hemisphere 180.6
1938 Female, age 85, left hemisphere 168.0
2686 Male, age 75, right hemisphere 135.7
2613 Female, age 94, left hemisphere 111.9
Hippocampus, CA1
nTPM: 152.4
2045 Male, age 76, both hemispheres 167.2
2749 Male, age 80, left hemisphere 165.4
2527 Male, age 74, both hemispheres 160.6
2082 Female, age 91, right hemisphere 141.8
1873 Female, age 85, both hemispheres 126.8
Hippocampus, CA2
nTPM: 174.7
2249 Male, age 74, both hemispheres 210.3
2113 Female, age 91, right hemisphere 177.7
1963 Male, age 80, left hemisphere 166.8
1892 Male, age 76, both hemispheres 164.8
2437 Female, age 94, left hemisphere 164.7
1940 Female, age 85, left hemisphere 163.9
Hippocampus, CA3
nTPM: 160.9
1867 Male, age 76, both hemispheres 215.0
2436 Male, age 74, both hemispheres 193.8
1891 Female, age 85, both hemispheres 150.9
2137 Male, age 80, left hemisphere 149.2
2620 Female, age 94, left hemisphere 141.8
2861 Female, age 67, both hemispheres 114.9
Parahippocampal cortex
nTPM: 153.0
2018 Male, age 76, both hemispheres 234.3
1990 Female, age 91, right hemisphere 181.6
2532 Female, age 72, left hemisphere 170.3
1850 Male, age 80, both hemispheres 157.8
1933 Female, age 85, both hemispheres 144.5
2250 Female, age 67, right hemisphere 143.8
2692 Male, age 74, both hemispheres 143.3
2245 Female, age 91, both hemispheres 133.8
2622 Female, age 67, right hemisphere 118.0
2693 Female, age 94, both hemispheres 103.0
Perirhinal gyrus
nTPM: 152.7
1794 Male, age 80, right hemisphere 187.4
2521 Female, age 94, right hemisphere 160.1
1847 Female, age 91, left hemisphere 152.4
2848 Male, age 76, right hemisphere 133.3
1841 Female, age 85, right hemisphere 130.4
Subiculum
nTPM: 172.8
2042 Male, age 76, both hemispheres 200.7
1901 Male, age 80, both hemispheres 187.4
1977 Female, age 85, both hemispheres 185.6
2619 Male, age 74, both hemispheres 177.6
2729 Female, age 91, right hemisphere 166.8
2438 Female, age 94, left hemisphere 119.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 128.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 128.7
Samples: 255

Max nTPM: 353.3
Min nTPM: 76.1
Std nTPM: 35.9
Median nTPM: 123.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 353.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 346.7
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 303.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 283.5
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 256.2
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 218.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 207.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 202.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 200.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 199.0
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 191.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 165.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 165.0
FF:10153-102I9 76 years, female 192.0
FF:10169-103B7 60 years, female 138.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 150.1
Pig sample Sample description nTPM
Subiculum
nTPM: 121.9
Samples: 4

Max nTPM: 152.9
Min nTPM: 105.2
Sample A Female 152.9
Sample B Female 118.2
Sample C Male 111.1
Sample D Male 105.2
Dorsal hippocampus
nTPM: 150.1
Samples: 4

Max nTPM: 197.9
Min nTPM: 106.8
Sample A Female 197.9
Sample B Female 142.0
Sample C Male 153.6
Sample D Male 106.8
Entorhinal cortex
nTPM: 114.5
Samples: 4

Max nTPM: 132.6
Min nTPM: 89.1
Sample A Female 119.0
Sample B Female 132.6
Sample C Male 117.3
Sample D Male 89.1
Ventral hippocampus
nTPM: 138.5
Samples: 4

Max nTPM: 168.4
Min nTPM: 104.5
Sample A Female 139.4
Sample B Female 104.5
Sample C Male 168.4
Sample D Male 141.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 309.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 309.8
Samples: 4

Max nTPM: 318.0
Min nTPM: 301.2
Sample A Male 301.2
Sample B Male 318.0
Sample C Female 302.0
Sample D Female 317.9
Hippocampal formation
nTPM: 305.3
Samples: 4

Max nTPM: 315.6
Min nTPM: 295.3
Sample A Male 311.5
Sample B Male 298.7
Sample C Female 315.6
Sample D Female 295.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 28.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 28.3
293263 Antisense, RP_040617_01_A10, Mouse strain C57BL/6J (56 days, male) 28.3

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