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RPL8
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RPL8
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:403.4 nTPM
FANTOM5:148.2 Scaled Tags Per Million
Pig:0.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA045095Antibody HPA050165
Glial cells MediumMedium
Neuronal cells HighMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

403.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 403.4
Samples: 300

Max nTPM: 1208.5
Min nTPM: 148.9
Std nTPM: 110.9
Median nTPM: 385.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1208.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 695.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 694.9
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 686.8
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 685.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 666.0
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 658.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 650.7
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 648.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 637.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 629.7
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 628.2
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 617.6
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 599.9
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 596.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 592.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 591.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 591.4
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 589.4
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 588.7
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 587.0
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 586.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 574.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 568.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 565.2
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 564.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 564.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 550.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 545.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 542.9
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 539.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 539.5
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 535.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 533.7
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 525.3
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 525.1
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 522.2
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 521.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 517.6
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 515.7
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 514.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 512.4
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 511.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 510.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 509.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 506.0
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 505.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 501.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 500.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 499.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 498.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 496.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 496.8
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 496.0
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 484.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 483.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 483.4
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 482.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 482.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 478.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 478.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 475.0
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 473.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 472.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 472.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 470.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 469.3
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 467.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 463.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 463.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 462.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 461.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 461.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 460.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 458.5
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 458.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 458.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 457.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 456.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 455.5
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 455.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 453.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 453.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 453.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 449.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 448.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 444.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 444.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 443.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 441.2
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 439.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 436.9
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 436.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 435.9
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 431.8
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 431.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 430.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 429.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 428.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 428.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 428.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 428.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 427.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 427.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 426.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 425.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 424.6
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 424.6
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 424.2
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 424.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 422.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 421.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 421.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 421.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 420.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 420.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 418.0
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 416.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 415.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 412.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 411.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 411.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 410.8
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 410.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 409.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 407.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 407.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 404.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 404.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 404.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 403.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 403.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 402.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 402.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 402.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 402.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 401.7
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 401.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 398.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 398.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 396.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 396.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 395.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 395.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 393.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 392.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 390.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 389.9
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 387.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 386.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 385.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 384.9
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 384.8
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 384.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 384.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 383.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 383.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 382.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 380.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 380.1
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 380.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 380.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 379.1
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 379.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 378.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 377.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 376.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 375.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 375.6
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 375.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 374.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 373.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 372.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 372.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 370.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 370.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 369.1
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 368.7
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 367.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 365.4
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 365.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 363.3
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 362.9
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 362.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 359.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 358.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 358.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 357.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 355.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 354.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 353.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 350.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 348.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 348.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 348.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 348.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 346.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 346.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 344.9
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 343.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 342.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 341.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 341.6
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 341.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 341.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 340.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 338.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 337.9
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 337.1
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 336.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 336.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 336.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 336.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 335.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 333.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 332.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 332.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 332.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 331.6
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 330.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 330.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 328.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 327.1
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 326.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 326.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 325.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 324.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 323.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 323.5
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 321.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 321.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 321.1
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 320.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 320.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 319.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 318.3
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 318.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 318.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 317.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 317.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 317.1
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 316.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 314.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 312.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 312.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 311.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 311.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 311.5
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 309.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 306.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 306.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 305.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 304.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 303.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 301.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 300.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 300.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 300.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 299.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 298.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 297.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 295.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 294.9
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 294.8
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 293.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 293.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 291.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 291.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 291.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 289.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 287.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 286.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 286.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 283.0
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 281.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 280.3
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 280.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 278.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 275.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 274.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 272.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 271.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 261.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 261.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 259.7
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 259.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 258.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 256.3
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 253.9
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 252.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 251.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 250.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 249.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 246.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 240.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 231.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 225.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 197.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 174.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 148.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

148.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 148.2
FF:10164-103B2 76 years, female 148.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.2
Pig sample Sample description nTPM
Caudate
nTPM: 0.2
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.1
Sample A Female 0.1
Sample B Female 0.1
Sample C Male 0.1
Sample D Male 0.4

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