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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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  • CELL LINE

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  • EVOLUTION

  • RPL26
EVOLUTIONARY SPINAL CORD Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1840.7 nTPM
HPA Brain:649.7 nTPM
GTEx:1840.7 nTPM
FANTOM5:117.9 Scaled Tags Per Million
Macaque:611.9 nTPM
Mouse:404.9 nTPM
Rat:0.6 nTPM
Pig:389.6 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - PROTEINTALKS DB MS
Median intensity 28590
Sample Intensity
Spinal cord_01
58925
Spinal cord_02
36692
Spinal cord_03
23332
Spinal cord_04
38275
Spinal cord_05
18346
Spinal cord_06
28321
Spinal cord_07
25291
Spinal cord_08
28860

SPINAL CORD - HPA Brain Stereo-seq

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

649.7
Sample id Sample description nTPM
Anterior funiculus (white matter)
nTPM: 578.0
2193 Male, age 75, both hemispheres 626.8
2734 Male, age 80, both hemispheres 613.2
2819 Male, age 47, both hemispheres 585.5
2818 Female, age 79, both hemispheres 486.6
Cervical spinal cord, central gray
nTPM: 453.3
2565 Male, age 75, midline 577.9
1981 Female, age 72, midline 520.2
2048 Male, age 55, midline 416.1
2816 Male, age 47, midline 386.5
2194 Female, age 79, both hemispheres 365.8
Cervical spinal cord, dorsal horn
nTPM: 497.0
2069 Male, age 47, both hemispheres 626.9
2296 Male, age 66, both hemispheres 587.7
2173 Female, age 72, unknown 551.8
1877 Male, age 55, unknown 500.7
2721 Male, age 90, both hemispheres 369.1
2297 Male, age 75, both hemispheres 345.6
Cervical spinal cord, ventral horn
nTPM: 649.7
2480 Male, age 75, both hemispheres 979.2
2809 Male, age 90, both hemispheres 730.7
2098 Female, age 72, unknown 700.5
2068 Male, age 55, unknown 590.2
2295 Male, age 66, both hemispheres 584.7
2820 Female, age 79, both hemispheres 312.6
Dorsal funiculus (white matter)
nTPM: 525.2
2810 Male, age 90, both hemispheres 608.4
2128 Male, age 75, both hemispheres 597.7
2812 Male, age 66, both hemispheres 492.2
2064 Female, age 79, both hemispheres 470.6
2817 Male, age 47, both hemispheres 457.3
Lateral funiculus (white matter)
nTPM: 592.5
2192 Male, age 75, both hemispheres 665.0
2094 Female, age 79, both hemispheres 602.6
2099 Male, age 90, both hemispheres 559.5
2294 Male, age 66, both hemispheres 542.8

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1840.7
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1840.7
Samples: 204

Max nTPM: 4921.9
Min nTPM: 799.9
Std nTPM: 607.3
Median nTPM: 1750.2
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 4921.9
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 3542.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 3307.0
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 3275.7
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 3139.6
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 3135.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 3124.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 3114.9
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 3067.0
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 3061.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 3050.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 3014.1
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 2845.0
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 2792.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 2782.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 2773.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 2742.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 2723.0
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 2683.6
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 2662.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 2659.8
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 2643.1
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 2629.3
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 2598.9
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 2597.5
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 2543.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 2536.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 2506.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 2496.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 2494.0
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 2483.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 2477.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 2454.9
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 2422.4
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 2419.7
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 2418.0
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 2399.9
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 2383.2
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 2355.0
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 2345.7
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 2331.1
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 2318.7
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 2314.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 2256.4
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 2229.7
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 2228.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 2225.2
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 2200.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 2190.0
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 2154.4
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 2148.2
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 2138.5
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 2128.8
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 2125.9
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 2124.0
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 2095.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 2095.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 2072.0
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 2058.3
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 2057.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 2056.8
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 2046.7
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 2045.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 2039.7
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 2029.6
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 2024.3
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 2022.3
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 2015.7
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 2010.5
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 2010.2
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 1980.8
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 1971.8
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 1963.7
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 1956.6
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 1951.4
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 1930.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1926.8
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 1923.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1916.0
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 1910.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1907.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1903.3
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1900.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1899.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1894.8
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 1892.4
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1883.2
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1882.6
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1868.8
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1868.4
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1867.6
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1864.7
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 1858.4
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 1856.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1849.2
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 1839.4
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1839.3
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1805.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1779.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1771.7
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1761.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1752.2
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1748.2
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1730.6
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 1728.2
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1724.2
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 1715.6
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 1707.6
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1703.4
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1701.9
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 1685.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1675.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1674.8
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1674.3
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1673.6
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 1647.7
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1634.3
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 1632.8
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1625.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1617.6
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 1617.3
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1617.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1611.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1609.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 1587.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1579.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1577.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1577.7
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1566.2
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1565.4
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 1544.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1536.1
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 1532.5
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1528.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1526.2
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1517.5
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 1501.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1496.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1491.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1486.7
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 1483.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1483.0
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1477.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1474.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1468.2
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1446.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1442.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1436.7
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1427.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1424.5
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1406.6
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1403.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1385.4
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 1368.6
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1363.5
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1358.9
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 1347.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 1322.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 1322.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 1301.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 1300.5
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 1299.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1293.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 1284.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1283.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 1276.9
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 1271.7
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 1271.0
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1270.6
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 1268.1
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 1252.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1246.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 1240.8
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1225.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 1223.5
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 1212.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 1206.0
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1205.9
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 1205.9
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 1201.2
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 1185.6
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 1180.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 1180.0
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 1167.8
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 1144.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 1138.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 1132.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 1132.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1112.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 1089.9
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 1086.9
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1082.1
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1058.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 1057.0
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 1053.7
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 1042.6
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 1038.6
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 1010.5
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 1000.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 957.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 940.5
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 920.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 836.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 799.9
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

117.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 117.9
FF:10159-103A6 76 years, female 124.7
FF:10181-103D1 60 years, female 111.2

SPINAL CORD - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

611.9
Macaque sample Sample description nTPM
Dorsal spinal cord
nTPM: 556.6
Samples: 2

Max nTPM: 586.7
Min nTPM: 526.5
Sample A 586.7
Sample B 526.5
Ventral spinal cord
nTPM: 611.9
Samples: 1

Max nTPM: 611.9
Min nTPM: 611.9
Sample A 611.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

389.6
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 389.6
Samples: 4

Max nTPM: 528.1
Min nTPM: 264.3
Sample A Female 265.7
Sample B Female 528.1
Sample C Male 500.3
Sample D Male 264.3
Ventral spinal cord
nTPM: 328.8
Samples: 4

Max nTPM: 392.7
Min nTPM: 262.4
Sample A Female 262.4
Sample B Female 382.6
Sample C Male 392.7
Sample D Male 277.6

SPINAL CORD - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

404.9
Mouse sample Sample description nTPM
Spinal cord
nTPM: 404.9
Samples: 4

Max nTPM: 452.4
Min nTPM: 312.9
Sample A 452.4
Sample B 312.9
Sample C 409.0
Sample D 445.2

SPINAL CORD - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.6
Rat sample Sample description nTPM
Ventral spinal cord
nTPM: 0.6
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.2
Sample A 0.8
Sample A 0.4
Sample A 0.2
Sample A 1.0

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