HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:19.8 nTPM
HPA Brain:53.3 nTPM
GTEx:19.8 nTPM
FANTOM5:123.0 Scaled Tags Per Million
Pig:37.0 nTPM
Mouse:14.4 nTPM
Allen mouse:6.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009295
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 53.3
Sample id Sample description nTPM
Hippocampus
nTPM: 47.7
1911 Female, age 85, right hemisphere 59.1
2148 Female, age 91, left hemisphere 50.7
2621 Female, age 67, right hemisphere 49.8
1898 Male, age 80, left hemisphere 43.4
2529 Female, age 94, left hemisphere 41.9
1855 Male, age 76, left hemisphere 41.1
Dentate gyrus
nTPM: 45.0
2531 Female, age 67, both hemispheres 58.3
1927 Female, age 91, both hemispheres 46.4
2246 Female, age 85, both hemispheres 45.8
2010 Male, age 76, both hemispheres 44.8
2528 Male, age 74, both hemispheres 44.3
2530 Female, age 94, left hemisphere 30.2
Entorhinal gyrus
nTPM: 47.7
2613 Female, age 94, left hemisphere 56.4
2686 Male, age 75, right hemisphere 50.5
2117 Female, age 91, right hemisphere 49.2
1938 Female, age 85, left hemisphere 47.7
2764 Male, age 80, right hemisphere 43.9
1787 Male, age 76, left hemisphere 38.8
Hippocampus, CA1
nTPM: 49.8
2749 Male, age 80, left hemisphere 54.0
2082 Female, age 91, right hemisphere 51.9
2045 Male, age 76, both hemispheres 50.4
1873 Female, age 85, both hemispheres 48.8
2527 Male, age 74, both hemispheres 43.7
Hippocampus, CA2
nTPM: 44.0
2113 Female, age 91, right hemisphere 53.8
2249 Male, age 74, both hemispheres 45.4
1940 Female, age 85, left hemisphere 44.7
1963 Male, age 80, left hemisphere 42.6
1892 Male, age 76, both hemispheres 40.5
2437 Female, age 94, left hemisphere 37.1
Hippocampus, CA3
nTPM: 53.3
2620 Female, age 94, left hemisphere 62.9
2861 Female, age 67, both hemispheres 56.0
2137 Male, age 80, left hemisphere 55.8
2436 Male, age 74, both hemispheres 52.8
1867 Male, age 76, both hemispheres 49.0
1891 Female, age 85, both hemispheres 43.2
Parahippocampal cortex
nTPM: 49.5
2622 Female, age 67, right hemisphere 60.4
2693 Female, age 94, both hemispheres 54.3
1933 Female, age 85, both hemispheres 50.7
2018 Male, age 76, both hemispheres 50.7
2245 Female, age 91, both hemispheres 49.8
2250 Female, age 67, right hemisphere 48.4
2532 Female, age 72, left hemisphere 48.4
1850 Male, age 80, both hemispheres 44.3
1990 Female, age 91, right hemisphere 44.1
2692 Male, age 74, both hemispheres 43.8
Perirhinal gyrus
nTPM: 46.7
1841 Female, age 85, right hemisphere 50.7
2521 Female, age 94, right hemisphere 50.6
1794 Male, age 80, right hemisphere 46.0
1847 Female, age 91, left hemisphere 43.9
2848 Male, age 76, right hemisphere 42.2
Subiculum
nTPM: 43.7
2042 Male, age 76, both hemispheres 48.4
1901 Male, age 80, both hemispheres 46.2
2729 Female, age 91, right hemisphere 45.4
1977 Female, age 85, both hemispheres 44.8
2619 Male, age 74, both hemispheres 39.4
2438 Female, age 94, left hemisphere 38.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 19.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.8
Samples: 197

Max nTPM: 35.2
Min nTPM: 5.1
Std nTPM: 5.0
Median nTPM: 19.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 35.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 34.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 32.9
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 32.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 31.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 31.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 30.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 30.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 29.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 29.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 28.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 123.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 123.0
FF:10169-103B7 60 years, female 136.0
FF:10153-102I9 76 years, female 110.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 37.0
Pig sample Sample description nTPM
Subiculum
nTPM: 35.2
Samples: 4

Max nTPM: 38.4
Min nTPM: 29.9
Sample A Female 29.9
Sample B Female 37.6
Sample C Male 34.7
Sample D Male 38.4
Dorsal hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 40.6
Min nTPM: 22.6
Sample A Female 22.6
Sample B Female 33.4
Sample C Male 30.8
Sample D Male 40.6
Entorhinal cortex
nTPM: 37.0
Samples: 4

Max nTPM: 41.9
Min nTPM: 32.5
Sample A Female 32.5
Sample B Female 38.5
Sample C Male 34.9
Sample D Male 41.9
Ventral hippocampus
nTPM: 31.2
Samples: 4

Max nTPM: 42.1
Min nTPM: 18.6
Sample A Female 32.5
Sample B Female 42.1
Sample C Male 18.6
Sample D Male 31.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 14.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.3
Samples: 4

Max nTPM: 17.6
Min nTPM: 11.5
Sample A Male 13.0
Sample B Male 17.6
Sample C Female 15.1
Sample D Female 11.5
Hippocampal formation
nTPM: 14.4
Samples: 4

Max nTPM: 17.9
Min nTPM: 10.3
Sample A Male 17.9
Sample B Male 14.8
Sample C Female 10.3
Sample D Female 14.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.2
74265183 Antisense, RP_051219_03_B10, Mouse strain C57BL/6J (56 days, male) 10.4
68148693 Antisense, RP_041116_01_H07, Mouse strain C57BL/6J (56 days, male) 8.1
71161363 Antisense, RP_050810_01_A10, Mouse strain C57BL/6J (56 days, male) 0.0

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