We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPN1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RPN1
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:57.5 nTPM
HPA Brain:99.1 nTPM
GTEx:57.5 nTPM
Pig:76.5 nTPM
Mouse:85.4 nTPM
Allen mouse:12.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

99.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 76.3
2226 Male, age 75, left hemisphere 88.9
1961 Female, age 42, unknown 63.8
Dorsomedial nucleus
nTPM: 73.6
2041 Female, age 72, unknown 83.6
1989 Male, age 62, unknown 71.1
2017 Female, age 42, unknown 66.0
Lateral hypothalamic area
nTPM: 94.7
1791 Male, age 80, right hemisphere 108.5
2228 Male, age 66, unknown 103.6
2271 Male, age 75, both hemispheres 95.6
2412 Male, age 62, unknown 71.2
Mammillary body
nTPM: 83.7
1923 Female, age 72, unknown 99.1
2413 Male, age 66, unknown 85.8
1945 Male, age 80, right hemisphere 82.2
1948 Female, age 72, unknown 75.9
1834 Female, age 42, unknown 75.3
Paraventricular nucleus
nTPM: 74.3
2700 Male, age 62, unknown 74.3
Preoptic area
nTPM: 74.7
1907 Male, age 80, right hemisphere 79.5
2414 Female, age 72, unknown 74.4
1861 Female, age 42, unknown 70.2
Supraoptic nucleus
nTPM: 99.1
2043 Male, age 62, unknown 102.9
2835 Female, age 72, unknown 97.9
1894 Female, age 72, unknown 96.7
Ventromedial nucleus
nTPM: 66.4
1982 Female, age 72, unknown 70.4
1822 Female, age 42, unknown 62.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 57.5
Samples: 257

Max nTPM: 155.2
Min nTPM: 28.1
Std nTPM: 14.4
Median nTPM: 55.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 155.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 106.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 104.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 103.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 102.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 102.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 97.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 94.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 91.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 88.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 87.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 86.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 85.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 84.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 79.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 78.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 77.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 77.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 77.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 74.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 74.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 74.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 74.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 72.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 72.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 72.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 71.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 71.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 71.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 70.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 70.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 70.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 69.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 69.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 69.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 69.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 69.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 68.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 68.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 68.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 68.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 67.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 67.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 67.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 67.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 67.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 67.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 67.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 67.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 66.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 66.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 66.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 66.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 66.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 65.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 65.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 65.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 65.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 64.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 64.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 64.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 63.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 63.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 63.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 63.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 62.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 62.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 62.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 62.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 62.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 62.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 62.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 62.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 62.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 62.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 61.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 61.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 61.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 61.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 61.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 61.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 60.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 60.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 60.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 60.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 60.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 60.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 60.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 60.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 60.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 60.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 59.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 59.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 59.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 59.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 59.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 59.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 59.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 59.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 58.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 58.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 58.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 58.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 58.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 58.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 58.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 58.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 57.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 57.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 57.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 57.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 57.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 57.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 57.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 57.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 57.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 56.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 56.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 56.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 56.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 56.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 56.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 55.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 55.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 55.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 55.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 55.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 55.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 55.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 54.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 54.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 54.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 54.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 54.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 54.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 54.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 54.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 54.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 53.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 53.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 53.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 53.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 53.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 53.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 53.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 53.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 53.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 53.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 52.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 52.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 52.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 52.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 52.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 52.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 52.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 52.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 52.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 51.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 51.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 51.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 51.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 51.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 51.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 51.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 51.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 51.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 51.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 50.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 50.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 50.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 50.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 50.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 50.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 50.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 50.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 50.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 50.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 50.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 50.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 49.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 49.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 49.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 49.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 49.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 49.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 48.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 48.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 48.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 48.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 48.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 48.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 48.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 48.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 48.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 48.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 48.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 47.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 47.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 47.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 47.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 47.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 47.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 47.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 47.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 47.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 46.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 46.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 46.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 46.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 46.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 46.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 46.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 46.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 45.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 45.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 45.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 45.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 45.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 45.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 45.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 44.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 44.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 44.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 44.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 44.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 44.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 44.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 44.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 44.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 43.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 43.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 43.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 43.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 43.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 43.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 43.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 43.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 42.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 42.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 42.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 42.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 42.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 41.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 41.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 41.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 39.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 39.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 39.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 39.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 36.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 36.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 35.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 34.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 34.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 32.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 30.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 28.1
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 76.5
Samples: 4

Max nTPM: 84.2
Min nTPM: 68.4
Sample A Female 84.2
Sample B Female 72.3
Sample C Male 81.2
Sample D Male 68.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 85.4
Samples: 4

Max nTPM: 89.6
Min nTPM: 80.9
Sample A Male 80.9
Sample B Male 89.6
Sample C Female 88.0
Sample D Female 83.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 12.1
75774675 Antisense, RP_060530_01_C12, Mouse strain C57BL/6J (56 days, male) 14.3
638734 Antisense, RP_040831_02_F02, Mouse strain C57BL/6J (56 days, male) 9.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo