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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • CELL LINE

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  • EVOLUTION

  • CAMKV
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:186.1 nTPM
GTEx:110.4 nTPM
FANTOM5:703.5 Scaled Tags Per Million
Macaque:148.2 nTPM
Pig:231.0 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

186.1
Sample id Sample description nTPM
Putamen
nTPM: 186.1
1937 Female, age 91, right hemisphere 310.2
1838 Male, age 80, right hemisphere 286.5
1829 Male, age 74, unknown 196.8
2466 Female, age 79, unknown 152.2
2647 Male, age 75, left hemisphere 147.3
2489 Female, age 72, unknown 106.1
2482 Female, age 94, left hemisphere 103.4

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.4
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 110.4
Samples: 254

Max nTPM: 303.2
Min nTPM: 5.9
Std nTPM: 74.5
Median nTPM: 101.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 303.2
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 299.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 290.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 283.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 277.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 274.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 267.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 264.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 255.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 254.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 248.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 248.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 247.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 243.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 241.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 237.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 235.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 232.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 231.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 230.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 225.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 222.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 222.7
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 218.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 218.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 212.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 212.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 211.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 209.4
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 206.6
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 204.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 204.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 203.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 203.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 201.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 200.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 200.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 199.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 197.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 197.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 197.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 191.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 190.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 190.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 189.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 188.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 187.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 186.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 186.6
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 185.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 183.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 182.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 180.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 179.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 179.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 178.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 177.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 177.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 175.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 174.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 172.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 172.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 171.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 170.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 169.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 168.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 168.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 166.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 165.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 164.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 162.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 162.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 158.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 156.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 153.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 152.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 152.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 151.6
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 150.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 150.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 150.0
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 149.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 148.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 142.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 140.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 139.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 138.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 137.2
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 135.5
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 135.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 135.0
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 134.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 132.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 129.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 129.8
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 128.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 128.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 127.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 127.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 125.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 124.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 123.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 122.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 122.3
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 119.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 118.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 118.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 114.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 114.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 113.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 113.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 112.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 111.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 111.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 110.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 110.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 109.1
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 108.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 108.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 108.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 106.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 106.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 105.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 105.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 103.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 103.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 102.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 101.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 100.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 99.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 99.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 99.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 97.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 96.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 95.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 95.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 94.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 94.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 94.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 92.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 89.0
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 88.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 85.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 85.0
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 80.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 78.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 76.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 75.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 75.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 73.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 73.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 73.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 73.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 72.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 72.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 70.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 68.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 66.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 63.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 62.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 62.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 62.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 60.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 60.5
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 59.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 59.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 58.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 58.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 58.6
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 57.9
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 57.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 57.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 57.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 57.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 55.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 54.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 53.4
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 52.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 52.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 52.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 52.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 50.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 50.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 50.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 49.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 48.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 47.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 46.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 44.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 43.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 43.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 42.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 42.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 42.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 42.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 42.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 41.9
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 40.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 40.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 40.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 40.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 39.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 39.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 38.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 37.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 35.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 34.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 34.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 33.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 33.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 33.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 31.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 31.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 31.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 30.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 30.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 29.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 28.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 28.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 25.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 25.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 25.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 25.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 25.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 25.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 24.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 23.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 21.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 21.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 21.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 20.8
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 20.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 19.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 18.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 18.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 17.9
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 16.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 16.0
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 15.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 15.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 14.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 13.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 13.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 13.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 10.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 10.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 9.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 9.4
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 8.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 8.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 7.9
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 7.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 7.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 5.9
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

703.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 703.5
FF:10176-103C5 60 years, female 703.5

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

148.2
Macaque sample Sample description nTPM
Putamen
nTPM: 148.2
Samples: 2

Max nTPM: 154.4
Min nTPM: 142.0
Sample A 154.4
Sample B 142.0

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

231.0
Pig sample Sample description nTPM
Putamen
nTPM: 231.0
Samples: 3

Max nTPM: 275.5
Min nTPM: 195.0
Sample B Female 195.0
Sample C Male 275.5
Sample D Male 222.5

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