HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:22.6 nTPM
HPA Brain:18.0 nTPM
GTEx:22.6 nTPM
FANTOM5:8.9 Scaled Tags Per Million
Pig:17.1 nTPM
Mouse:28.7 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052187
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 18.0
Sample id Sample description nTPM
Hippocampus
nTPM: 16.0
1898 Male, age 80, left hemisphere 20.1
2621 Female, age 67, right hemisphere 16.2
2148 Female, age 91, left hemisphere 16.1
1911 Female, age 85, right hemisphere 15.7
1855 Male, age 76, left hemisphere 14.1
2529 Female, age 94, left hemisphere 14.0
Dentate gyrus
nTPM: 16.2
1927 Female, age 91, both hemispheres 18.6
2010 Male, age 76, both hemispheres 17.6
2528 Male, age 74, both hemispheres 17.0
2530 Female, age 94, left hemisphere 15.7
2246 Female, age 85, both hemispheres 14.5
2531 Female, age 67, both hemispheres 14.1
Entorhinal gyrus
nTPM: 14.3
2764 Male, age 80, right hemisphere 16.6
2117 Female, age 91, right hemisphere 16.4
1787 Male, age 76, left hemisphere 13.8
2686 Male, age 75, right hemisphere 13.6
1938 Female, age 85, left hemisphere 13.3
2613 Female, age 94, left hemisphere 12.3
Hippocampus, CA1
nTPM: 16.9
2749 Male, age 80, left hemisphere 19.0
1873 Female, age 85, both hemispheres 18.4
2527 Male, age 74, both hemispheres 16.0
2082 Female, age 91, right hemisphere 15.8
2045 Male, age 76, both hemispheres 15.2
Hippocampus, CA2
nTPM: 18.0
1963 Male, age 80, left hemisphere 21.3
1892 Male, age 76, both hemispheres 20.4
2437 Female, age 94, left hemisphere 18.7
2249 Male, age 74, both hemispheres 18.3
1940 Female, age 85, left hemisphere 15.4
2113 Female, age 91, right hemisphere 13.7
Hippocampus, CA3
nTPM: 16.6
1867 Male, age 76, both hemispheres 18.7
2620 Female, age 94, left hemisphere 17.8
2861 Female, age 67, both hemispheres 17.8
1891 Female, age 85, both hemispheres 16.7
2436 Male, age 74, both hemispheres 15.6
2137 Male, age 80, left hemisphere 13.2
Parahippocampal cortex
nTPM: 14.9
2018 Male, age 76, both hemispheres 18.0
2622 Female, age 67, right hemisphere 17.0
1933 Female, age 85, both hemispheres 16.0
1990 Female, age 91, right hemisphere 15.7
2250 Female, age 67, right hemisphere 14.7
2692 Male, age 74, both hemispheres 14.7
2245 Female, age 91, both hemispheres 13.6
2532 Female, age 72, left hemisphere 13.6
1850 Male, age 80, both hemispheres 13.4
2693 Female, age 94, both hemispheres 12.8
Perirhinal gyrus
nTPM: 14.2
1794 Male, age 80, right hemisphere 15.9
1847 Female, age 91, left hemisphere 15.3
2521 Female, age 94, right hemisphere 14.4
1841 Female, age 85, right hemisphere 13.8
2848 Male, age 76, right hemisphere 11.5
Subiculum
nTPM: 15.3
2619 Male, age 74, both hemispheres 16.8
1977 Female, age 85, both hemispheres 15.7
1901 Male, age 80, both hemispheres 15.5
2729 Female, age 91, right hemisphere 14.8
2042 Male, age 76, both hemispheres 14.3
2438 Female, age 94, left hemisphere 14.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 22.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.6
Samples: 197

Max nTPM: 42.6
Min nTPM: 10.6
Std nTPM: 5.6
Median nTPM: 21.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 42.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 40.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 38.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 38.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 35.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 35.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 34.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 34.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 33.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 33.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 33.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 8.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.9
FF:10153-102I9 76 years, female 9.5
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 17.1
Pig sample Sample description nTPM
Subiculum
nTPM: 13.7
Samples: 4

Max nTPM: 17.3
Min nTPM: 10.7
Sample A Female 17.3
Sample B Female 13.8
Sample C Male 12.9
Sample D Male 10.7
Dorsal hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 19.8
Min nTPM: 14.1
Sample A Female 19.8
Sample B Female 18.0
Sample C Male 16.6
Sample D Male 14.1
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 14.0
Min nTPM: 10.2
Sample A Female 12.5
Sample B Female 14.0
Sample C Male 13.7
Sample D Male 10.2
Ventral hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 20.6
Min nTPM: 12.8
Sample A Female 15.2
Sample B Female 12.8
Sample C Male 20.6
Sample D Male 14.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 28.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.7
Samples: 4

Max nTPM: 30.4
Min nTPM: 24.1
Sample A Male 24.1
Sample B Male 30.0
Sample C Female 30.4
Sample D Female 30.4
Hippocampal formation
nTPM: 28.6
Samples: 4

Max nTPM: 32.4
Min nTPM: 27.0
Sample A Male 27.1
Sample B Male 27.0
Sample C Female 27.7
Sample D Female 32.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
68845538 Antisense, RP_050224_02_A03, Mouse strain C57BL/6J (56 days, male) 0.6

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