HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:59.5 nTPM
HPA Brain:128.0 nTPM
GTEx:59.5 nTPM
FANTOM5:184.1 Scaled Tags Per Million
Pig:64.3 nTPM
Mouse:89.4 nTPM
Allen mouse:4.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019338
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 128.0
Sample id Sample description nTPM
Hippocampus
nTPM: 109.5
1898 Male, age 80, left hemisphere 126.3
2621 Female, age 67, right hemisphere 124.7
2148 Female, age 91, left hemisphere 108.2
2529 Female, age 94, left hemisphere 106.7
1855 Male, age 76, left hemisphere 104.3
1911 Female, age 85, right hemisphere 86.8
Dentate gyrus
nTPM: 110.1
2530 Female, age 94, left hemisphere 159.3
2010 Male, age 76, both hemispheres 128.1
1927 Female, age 91, both hemispheres 107.3
2531 Female, age 67, both hemispheres 103.4
2246 Female, age 85, both hemispheres 87.0
2528 Male, age 74, both hemispheres 75.2
Entorhinal gyrus
nTPM: 128.0
2764 Male, age 80, right hemisphere 148.2
2613 Female, age 94, left hemisphere 138.1
2686 Male, age 75, right hemisphere 132.9
1787 Male, age 76, left hemisphere 120.5
1938 Female, age 85, left hemisphere 114.9
2117 Female, age 91, right hemisphere 113.3
Hippocampus, CA1
nTPM: 101.3
2749 Male, age 80, left hemisphere 136.9
2045 Male, age 76, both hemispheres 105.4
1873 Female, age 85, both hemispheres 104.2
2527 Male, age 74, both hemispheres 86.9
2082 Female, age 91, right hemisphere 73.2
Hippocampus, CA2
nTPM: 107.1
1963 Male, age 80, left hemisphere 130.6
2437 Female, age 94, left hemisphere 118.4
1940 Female, age 85, left hemisphere 116.4
1892 Male, age 76, both hemispheres 113.3
2249 Male, age 74, both hemispheres 90.8
2113 Female, age 91, right hemisphere 73.3
Hippocampus, CA3
nTPM: 95.4
1867 Male, age 76, both hemispheres 119.9
2861 Female, age 67, both hemispheres 111.1
2620 Female, age 94, left hemisphere 109.9
1891 Female, age 85, both hemispheres 88.1
2137 Male, age 80, left hemisphere 86.8
2436 Male, age 74, both hemispheres 56.3
Parahippocampal cortex
nTPM: 110.3
2532 Female, age 72, left hemisphere 137.2
2622 Female, age 67, right hemisphere 125.9
1990 Female, age 91, right hemisphere 119.3
1850 Male, age 80, both hemispheres 119.1
1933 Female, age 85, both hemispheres 115.1
2245 Female, age 91, both hemispheres 115.1
2018 Male, age 76, both hemispheres 106.3
2692 Male, age 74, both hemispheres 104.0
2250 Female, age 67, right hemisphere 82.0
2693 Female, age 94, both hemispheres 78.6
Perirhinal gyrus
nTPM: 113.2
1847 Female, age 91, left hemisphere 135.8
1794 Male, age 80, right hemisphere 135.3
1841 Female, age 85, right hemisphere 103.2
2848 Male, age 76, right hemisphere 102.6
2521 Female, age 94, right hemisphere 89.1
Subiculum
nTPM: 109.6
2438 Female, age 94, left hemisphere 145.2
1901 Male, age 80, both hemispheres 114.0
1977 Female, age 85, both hemispheres 111.0
2042 Male, age 76, both hemispheres 105.0
2619 Male, age 74, both hemispheres 97.3
2729 Female, age 91, right hemisphere 85.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 59.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.5
Samples: 255

Max nTPM: 142.6
Min nTPM: 23.7
Std nTPM: 14.5
Median nTPM: 57.7
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 142.6
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 129.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 112.5
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 101.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 95.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 93.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 92.7
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 91.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 90.4
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 90.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 88.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 184.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 184.1
FF:10153-102I9 76 years, female 193.8
FF:10169-103B7 60 years, female 174.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 64.3
Pig sample Sample description nTPM
Subiculum
nTPM: 57.8
Samples: 4

Max nTPM: 76.3
Min nTPM: 46.2
Sample A Female 76.3
Sample B Female 53.7
Sample C Male 54.8
Sample D Male 46.2
Dorsal hippocampus
nTPM: 59.2
Samples: 4

Max nTPM: 68.5
Min nTPM: 46.8
Sample A Female 68.5
Sample B Female 58.1
Sample C Male 63.5
Sample D Male 46.8
Entorhinal cortex
nTPM: 64.3
Samples: 4

Max nTPM: 75.1
Min nTPM: 56.1
Sample A Female 63.2
Sample B Female 62.9
Sample C Male 75.1
Sample D Male 56.1
Ventral hippocampus
nTPM: 59.8
Samples: 4

Max nTPM: 75.2
Min nTPM: 48.2
Sample A Female 60.8
Sample B Female 48.2
Sample C Male 75.2
Sample D Male 54.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 89.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 89.4
Samples: 4

Max nTPM: 94.7
Min nTPM: 83.1
Sample A Male 90.5
Sample B Male 89.3
Sample C Female 83.1
Sample D Female 94.7
Hippocampal formation
nTPM: 81.8
Samples: 4

Max nTPM: 83.9
Min nTPM: 78.9
Sample A Male 78.9
Sample B Male 83.9
Sample C Female 83.7
Sample D Female 80.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
71211746 Antisense, RP_050816_02_D01, Mouse strain C57BL/6J (56 days, male) 4.2

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