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FAM219A
HPA
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  • TISSUE

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  • FAM219A
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:63.3 nTPM
HPA Brain:134.4 nTPM
GTEx:63.3 nTPM
Pig:59.4 nTPM
Mouse:91.7 nTPM
Allen mouse:2.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

134.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 115.2
1961 Female, age 42, unknown 116.6
2226 Male, age 75, left hemisphere 113.8
Dorsomedial nucleus
nTPM: 120.2
1989 Male, age 62, unknown 129.5
2041 Female, age 72, unknown 120.4
2017 Female, age 42, unknown 110.8
Lateral hypothalamic area
nTPM: 130.8
1791 Male, age 80, right hemisphere 138.8
2228 Male, age 66, unknown 138.7
2271 Male, age 75, both hemispheres 130.4
2412 Male, age 62, unknown 115.1
Mammillary body
nTPM: 134.4
1923 Female, age 72, unknown 164.8
1948 Female, age 72, unknown 148.1
1945 Male, age 80, right hemisphere 125.3
2413 Male, age 66, unknown 122.6
1834 Female, age 42, unknown 111.1
Paraventricular nucleus
nTPM: 117.1
2700 Male, age 62, unknown 117.1
Preoptic area
nTPM: 122.0
1907 Male, age 80, right hemisphere 130.7
1861 Female, age 42, unknown 119.4
2414 Female, age 72, unknown 115.9
Supraoptic nucleus
nTPM: 115.5
2835 Female, age 72, unknown 128.5
1894 Female, age 72, unknown 109.5
2043 Male, age 62, unknown 108.6
Ventromedial nucleus
nTPM: 117.8
1982 Female, age 72, unknown 144.6
1822 Female, age 42, unknown 91.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 63.3
Samples: 257

Max nTPM: 139.2
Min nTPM: 30.8
Std nTPM: 15.4
Median nTPM: 61.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 139.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 136.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 131.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 106.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 104.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 103.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 102.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 97.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 95.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 94.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 92.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 90.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 89.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 88.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 87.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 87.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 87.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 86.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 86.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 85.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 85.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 85.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 84.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 82.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 82.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 82.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 81.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 80.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 80.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 80.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 80.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 80.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 79.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 79.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 79.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 78.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 78.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 77.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 76.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 75.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 75.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 74.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 74.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 73.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 73.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 73.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 73.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 73.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 73.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 72.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 71.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 71.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 71.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 71.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 70.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 70.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 70.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 69.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 69.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 69.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 69.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 69.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 69.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 69.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 69.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 68.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 68.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 68.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 68.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 68.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 67.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 67.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 67.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 67.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 67.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 67.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 66.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 66.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 66.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 66.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 66.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 66.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 66.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 66.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 66.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 66.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 66.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 66.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 66.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 66.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 65.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 65.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 65.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 65.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 65.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 65.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 65.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 65.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 65.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 65.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 64.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 64.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 64.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 64.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 64.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 64.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 63.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 63.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 63.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 63.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 63.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 63.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 63.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 63.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 63.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 63.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 62.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 62.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 62.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 62.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 62.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 62.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 62.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 62.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 61.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 61.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 61.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 61.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 61.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 61.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 61.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 61.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 61.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 60.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 60.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 60.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 60.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 60.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 60.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 59.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 59.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 59.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 59.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 59.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 59.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 59.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 59.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 58.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 58.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 58.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 58.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 58.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 58.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 58.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 58.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 58.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 58.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 58.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 58.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 58.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 58.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 57.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 57.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 57.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 57.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 57.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 57.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 57.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 57.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 57.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 57.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 56.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 56.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 56.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 56.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 56.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 56.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 56.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 56.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 56.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 56.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 56.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 55.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 55.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 55.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 55.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 55.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 55.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 55.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 54.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 54.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 54.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 54.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 54.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 53.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 53.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 53.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 53.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 53.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 53.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 53.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 53.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 53.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 52.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 51.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 51.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 51.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 51.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 51.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 51.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 51.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 51.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 51.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 50.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 50.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 50.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 50.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 49.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 49.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 49.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 49.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 49.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 49.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 49.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 49.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 48.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 48.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 48.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 48.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 48.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 47.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 47.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 47.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 46.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 46.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 45.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 44.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 44.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 44.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 44.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 44.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 43.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 43.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 42.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 41.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 41.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 41.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 41.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 40.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 40.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 39.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 39.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 38.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 34.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 34.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 31.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 30.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 59.4
Samples: 4

Max nTPM: 68.8
Min nTPM: 51.9
Sample A Female 68.8
Sample B Female 60.1
Sample C Male 56.8
Sample D Male 51.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 91.7
Samples: 4

Max nTPM: 95.2
Min nTPM: 88.2
Sample A Male 95.2
Sample B Male 88.2
Sample C Female 93.4
Sample D Female 89.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.7
71211746 Antisense, RP_050816_02_D01, Mouse strain C57BL/6J (56 days, male) 2.7

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