HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:226.5 nTPM
HPA Brain:71.6 nTPM
GTEx:226.5 nTPM
FANTOM5:162.8 Scaled Tags Per Million
Mouse:0.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 71.6
Sample id Sample description nTPM
Hippocampus
nTPM: 71.6
2621 Female, age 67, right hemisphere 81.5
2529 Female, age 94, left hemisphere 76.9
1898 Male, age 80, left hemisphere 74.6
1855 Male, age 76, left hemisphere 68.1
2148 Female, age 91, left hemisphere 66.9
1911 Female, age 85, right hemisphere 61.5
Dentate gyrus
nTPM: 67.8
2530 Female, age 94, left hemisphere 92.9
2531 Female, age 67, both hemispheres 72.1
2246 Female, age 85, both hemispheres 71.7
2010 Male, age 76, both hemispheres 70.2
1927 Female, age 91, both hemispheres 57.0
2528 Male, age 74, both hemispheres 42.9
Entorhinal gyrus
nTPM: 67.7
2686 Male, age 75, right hemisphere 78.8
1787 Male, age 76, left hemisphere 74.8
1938 Female, age 85, left hemisphere 66.6
2117 Female, age 91, right hemisphere 66.3
2764 Male, age 80, right hemisphere 64.5
2613 Female, age 94, left hemisphere 55.4
Hippocampus, CA1
nTPM: 62.7
2749 Male, age 80, left hemisphere 69.0
1873 Female, age 85, both hemispheres 68.5
2045 Male, age 76, both hemispheres 63.9
2527 Male, age 74, both hemispheres 59.4
2082 Female, age 91, right hemisphere 52.5
Hippocampus, CA2
nTPM: 65.7
1892 Male, age 76, both hemispheres 81.0
2437 Female, age 94, left hemisphere 70.6
1963 Male, age 80, left hemisphere 69.3
1940 Female, age 85, left hemisphere 64.7
2249 Male, age 74, both hemispheres 54.8
2113 Female, age 91, right hemisphere 53.9
Hippocampus, CA3
nTPM: 61.3
1867 Male, age 76, both hemispheres 75.0
1891 Female, age 85, both hemispheres 69.7
2861 Female, age 67, both hemispheres 67.2
2137 Male, age 80, left hemisphere 58.6
2436 Male, age 74, both hemispheres 52.8
2620 Female, age 94, left hemisphere 44.6
Parahippocampal cortex
nTPM: 64.5
2532 Female, age 72, left hemisphere 77.8
2018 Male, age 76, both hemispheres 76.4
1850 Male, age 80, both hemispheres 75.3
2245 Female, age 91, both hemispheres 70.4
1933 Female, age 85, both hemispheres 63.0
2692 Male, age 74, both hemispheres 61.3
1990 Female, age 91, right hemisphere 60.2
2250 Female, age 67, right hemisphere 59.6
2622 Female, age 67, right hemisphere 57.0
2693 Female, age 94, both hemispheres 44.3
Perirhinal gyrus
nTPM: 66.4
1841 Female, age 85, right hemisphere 71.8
2848 Male, age 76, right hemisphere 70.4
1794 Male, age 80, right hemisphere 69.5
1847 Female, age 91, left hemisphere 65.0
2521 Female, age 94, right hemisphere 55.1
Subiculum
nTPM: 67.9
2438 Female, age 94, left hemisphere 80.8
2042 Male, age 76, both hemispheres 76.4
1901 Male, age 80, both hemispheres 75.1
1977 Female, age 85, both hemispheres 66.4
2619 Male, age 74, both hemispheres 59.0
2729 Female, age 91, right hemisphere 49.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 226.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 226.5
Samples: 255

Max nTPM: 701.8
Min nTPM: 111.4
Std nTPM: 71.4
Median nTPM: 211.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 701.8
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 572.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 509.2
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 470.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 419.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 386.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 377.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 370.1
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 364.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 360.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 360.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 162.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 162.8
FF:10153-102I9 76 years, female 187.6
FF:10169-103B7 60 years, female 138.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.2
Sample D Female 0.0

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo