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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:215.3 nTPM
HPA Brain:260.8 nTPM
GTEx:215.3 nTPM
Pig:81.5 nTPM
Mouse:39.4 nTPM
Allen mouse:2.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

260.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 260.8
2226 Male, age 75, left hemisphere 290.2
1961 Female, age 42, unknown 231.3
Dorsomedial nucleus
nTPM: 181.3
2041 Female, age 72, unknown 213.0
2017 Female, age 42, unknown 174.7
1989 Male, age 62, unknown 156.3
Lateral hypothalamic area
nTPM: 220.4
2228 Male, age 66, unknown 268.6
2271 Male, age 75, both hemispheres 231.3
1791 Male, age 80, right hemisphere 231.0
2412 Male, age 62, unknown 150.6
Mammillary body
nTPM: 145.5
1923 Female, age 72, unknown 179.7
1948 Female, age 72, unknown 152.6
1945 Male, age 80, right hemisphere 144.8
2413 Male, age 66, unknown 136.0
1834 Female, age 42, unknown 114.2
Paraventricular nucleus
nTPM: 186.1
2700 Male, age 62, unknown 186.1
Preoptic area
nTPM: 183.7
1907 Male, age 80, right hemisphere 224.9
1861 Female, age 42, unknown 165.1
2414 Female, age 72, unknown 161.2
Supraoptic nucleus
nTPM: 163.9
1894 Female, age 72, unknown 172.8
2835 Female, age 72, unknown 165.4
2043 Male, age 62, unknown 153.6
Ventromedial nucleus
nTPM: 224.9
1982 Female, age 72, unknown 250.7
1822 Female, age 42, unknown 199.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

215.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 215.3
Samples: 257

Max nTPM: 383.5
Min nTPM: 83.3
Std nTPM: 59.4
Median nTPM: 212.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 383.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 359.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 345.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 343.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 336.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 330.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 329.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 327.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 325.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 320.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 317.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 310.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 309.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 308.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 305.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 302.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 302.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 301.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 299.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 298.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 297.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 295.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 294.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 293.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 293.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 292.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 291.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 291.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 289.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 288.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 288.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 287.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 286.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 284.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 284.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 283.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 282.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 280.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 280.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 280.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 278.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 278.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 277.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 275.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 272.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 271.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 271.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 270.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 269.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 269.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 269.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 269.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 268.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 268.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 267.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 266.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 266.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 265.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 264.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 264.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 264.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 263.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 263.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 263.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 263.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 263.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 261.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 260.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 260.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 259.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 259.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 259.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 259.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 257.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 257.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 254.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 253.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 252.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 251.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 249.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 249.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 249.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 248.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 247.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 245.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 243.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 243.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 243.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 243.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 243.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 243.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 243.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 241.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 241.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 241.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 240.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 238.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 237.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 236.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 236.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 235.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 235.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 234.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 233.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 232.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 232.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 230.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 230.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 229.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 229.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 227.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 226.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 225.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 223.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 222.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 222.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 222.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 222.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 221.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 221.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 220.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 219.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 217.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 217.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 214.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 214.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 214.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 212.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 212.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 212.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 211.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 210.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 209.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 209.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 208.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 208.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 207.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 207.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 206.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 205.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 205.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 204.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 203.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 203.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 200.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 200.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 199.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 199.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 199.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 198.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 198.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 196.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 196.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 195.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 195.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 195.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 195.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 194.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 194.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 193.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 192.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 192.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 192.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 191.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 191.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 191.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 191.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 191.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 190.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 188.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 187.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 183.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 182.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 182.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 182.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 182.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 181.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 181.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 179.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 178.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 178.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 176.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 175.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 173.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 173.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 172.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 172.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 172.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 172.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 171.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 171.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 170.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 169.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 168.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 166.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 165.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 165.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 165.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 164.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 163.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 163.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 162.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 161.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 160.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 160.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 158.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 158.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 158.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 158.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 157.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 157.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 156.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 154.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 152.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 152.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 150.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 150.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 148.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 145.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 144.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 143.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 142.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 142.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 140.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 140.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 140.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 140.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 137.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 137.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 136.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 134.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 134.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 131.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 131.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 130.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 129.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 128.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 128.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 128.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 126.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 123.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 123.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 123.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 123.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 121.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 120.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 118.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 117.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 116.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 114.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 112.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 112.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 110.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 105.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 104.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 98.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 83.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 81.5
Samples: 4

Max nTPM: 101.4
Min nTPM: 71.1
Sample A Female 101.4
Sample B Female 71.1
Sample C Male 75.4
Sample D Male 78.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 39.4
Samples: 4

Max nTPM: 41.9
Min nTPM: 34.5
Sample A Male 41.4
Sample B Male 41.9
Sample C Female 39.8
Sample D Female 34.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.9
112196711 Antisense, RP_110421_01_D11, Mouse strain C57BL/6J (56 days, male) 2.9
100144105 Antisense, RP_110421_01_D11, Mouse strain C57BL/6J (56 days, male) 1.6

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