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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • PHB1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN67 EYE3 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER2 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM8 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE11 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS
MIDDLE TEMPORAL GYRUS MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD WHITE MATTER
CORNEA LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS PENIS PROSTATE SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:25.3 nTPM
GTEx:41.4 nTPM
FANTOM5:15.9 Scaled Tags Per Million
Macaque:4.1 nTPM
Pig:78.5 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.3
Sample id Sample description nTPM
Putamen
nTPM: 25.3
2482 Female, age 94, left hemisphere 35.1
2647 Male, age 75, left hemisphere 25.7
2489 Female, age 72, unknown 25.0
2466 Female, age 79, unknown 23.9
1829 Male, age 74, unknown 23.3
1838 Male, age 80, right hemisphere 22.6
1937 Female, age 91, right hemisphere 21.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.4
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 41.4
Samples: 254

Max nTPM: 73.9
Min nTPM: 17.5
Std nTPM: 10.8
Median nTPM: 39.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 73.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 72.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 71.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 71.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 69.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 69.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 69.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 64.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 64.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 63.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 63.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 62.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 61.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 60.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 60.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 59.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 59.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 59.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 59.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 58.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 58.6
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 58.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 57.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 57.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 57.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 56.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 56.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 55.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 55.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 55.3
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 55.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 54.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 54.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 54.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 53.9
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 53.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 53.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 53.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 53.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 53.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 53.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 53.0
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 52.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 52.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 51.9
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 51.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 51.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 51.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 51.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 51.2
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 51.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 50.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 50.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 50.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 50.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 50.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 50.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 49.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 49.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 48.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 48.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 48.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 48.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 47.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 47.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 47.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 47.4
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 47.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 47.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 47.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 46.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 46.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 46.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 46.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 46.5
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 46.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 46.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 46.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 46.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 46.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 45.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 45.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 45.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 45.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 45.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 44.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 44.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 44.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 44.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 44.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 44.1
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 43.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 43.7
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 43.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 43.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 43.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 43.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 43.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 43.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 42.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 42.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 42.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 42.5
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 42.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 42.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 42.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 42.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 42.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 41.8
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 41.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 41.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 41.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 41.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 40.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 40.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 40.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 40.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 40.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 40.3
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 40.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 40.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 40.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 39.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 39.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 39.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 39.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 39.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 39.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 39.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 39.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 39.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 39.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 38.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 38.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 38.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 38.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 38.4
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 38.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 37.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 37.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 37.8
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 37.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 37.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 37.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 37.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 37.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 37.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 37.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 37.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 37.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 37.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 37.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 37.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 37.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 36.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 36.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 36.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 36.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 36.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 36.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 36.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 35.9
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 35.8
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 35.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 35.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 35.7
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 35.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 35.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 35.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 35.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 35.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 35.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 35.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 35.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 34.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 34.8
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 34.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 34.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 34.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 34.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 34.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 34.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 33.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 33.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 33.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 33.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 33.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 33.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 33.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 33.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 33.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 32.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 32.9
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 32.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 32.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 32.7
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 32.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 32.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 32.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 32.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 32.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 32.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 32.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 32.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 32.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 31.9
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 31.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 31.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 31.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 31.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 31.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 31.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 31.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 31.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 31.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 31.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 31.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 30.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 30.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 30.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 30.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 30.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 30.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 30.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 29.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 29.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 29.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 29.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 29.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 29.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 28.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 28.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 28.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 28.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 28.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 28.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 27.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 26.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 26.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 25.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 25.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 25.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 25.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 25.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 25.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 25.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 25.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 24.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 24.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 23.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 23.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 22.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 21.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 17.5
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

15.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 15.9
FF:10176-103C5 60 years, female 15.9

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4.1
Macaque sample Sample description nTPM
Putamen
nTPM: 4.2
Samples: 2

Max nTPM: 4.4
Min nTPM: 3.9
Sample A 3.9
Sample B 4.4

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.5
Pig sample Sample description nTPM
Putamen
nTPM: 78.5
Samples: 3

Max nTPM: 90.7
Min nTPM: 65.3
Sample B Female 65.3
Sample C Male 90.7
Sample D Male 79.6

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