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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:182.5 nTPM
HPA Brain:416.3 nTPM
GTEx:182.5 nTPM
Pig:6.6 nTPM
Mouse:4.4 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

416.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 64.1
2226 Male, age 75, left hemisphere 76.1
1961 Female, age 42, unknown 52.1
Dorsomedial nucleus
nTPM: 148.9
2017 Female, age 42, unknown 251.6
1989 Male, age 62, unknown 133.3
2041 Female, age 72, unknown 61.8
Lateral hypothalamic area
nTPM: 247.5
2228 Male, age 66, unknown 391.5
2412 Male, age 62, unknown 241.6
1791 Male, age 80, right hemisphere 181.0
2271 Male, age 75, both hemispheres 176.0
Mammillary body
nTPM: 324.7
1945 Male, age 80, right hemisphere 415.2
1834 Female, age 42, unknown 382.1
1948 Female, age 72, unknown 379.3
2413 Male, age 66, unknown 247.2
1923 Female, age 72, unknown 199.7
Paraventricular nucleus
nTPM: 416.3
2700 Male, age 62, unknown 416.3
Preoptic area
nTPM: 268.0
2414 Female, age 72, unknown 473.5
1861 Female, age 42, unknown 247.2
1907 Male, age 80, right hemisphere 83.4
Supraoptic nucleus
nTPM: 192.2
2043 Male, age 62, unknown 221.1
2835 Female, age 72, unknown 210.9
1894 Female, age 72, unknown 144.6
Ventromedial nucleus
nTPM: 57.4
1982 Female, age 72, unknown 62.0
1822 Female, age 42, unknown 52.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

182.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 182.5
Samples: 257

Max nTPM: 1126.9
Min nTPM: 13.6
Std nTPM: 168.9
Median nTPM: 122.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 1126.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 990.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 856.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 833.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 734.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 631.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 579.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 550.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 545.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 542.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 536.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 521.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 506.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 502.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 498.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 498.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 495.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 486.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 458.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 449.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 448.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 436.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 431.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 428.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 426.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 417.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 412.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 403.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 387.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 380.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 376.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 369.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 350.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 334.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 333.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 327.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 322.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 318.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 317.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 310.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 310.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 300.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 299.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 296.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 296.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 293.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 291.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 284.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 283.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 281.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 280.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 277.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 277.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 273.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 273.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 271.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 271.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 269.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 266.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 265.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 263.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 259.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 256.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 252.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 252.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 252.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 246.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 244.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 244.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 226.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 226.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 224.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 221.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 220.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 217.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 216.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 211.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 205.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 204.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 203.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 202.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 201.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 199.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 198.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 198.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 198.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 197.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 194.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 192.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 191.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 190.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 190.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 189.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 184.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 181.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 180.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 178.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 178.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 175.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 162.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 161.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 160.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 160.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 157.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 155.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 154.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 153.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 153.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 151.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 149.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 148.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 148.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 146.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 143.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 143.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 142.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 141.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 140.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 140.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 139.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 135.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 135.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 130.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 128.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 128.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 126.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 124.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 123.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 122.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 120.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 119.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 119.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 119.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 118.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 118.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 116.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 114.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 113.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 111.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 110.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 109.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 109.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 107.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 107.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 106.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 105.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 105.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 102.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 101.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 98.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 97.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 95.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 93.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 93.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 92.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 92.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 91.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 91.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 90.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 90.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 89.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 88.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 88.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 88.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 87.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 86.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 86.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 86.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 85.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 85.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 82.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 81.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 79.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 78.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 78.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 77.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 76.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 75.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 75.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 74.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 73.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 73.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 72.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 72.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 71.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 71.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 70.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 69.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 68.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 67.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 66.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 66.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 66.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 66.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 65.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 65.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 65.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 64.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 64.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 63.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 61.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 61.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 60.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 60.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 59.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 57.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 57.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 57.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 57.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 57.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 55.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 55.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 54.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 54.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 54.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 53.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 53.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 53.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 53.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 51.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 50.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 49.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 49.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 49.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 48.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 47.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 46.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 44.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 43.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 43.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 41.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 41.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 41.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 41.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 41.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 41.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 40.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 40.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 39.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 38.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 38.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 37.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 36.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 36.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 33.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 33.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 31.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 31.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 30.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 27.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 27.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 25.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 23.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 22.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 17.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 14.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 13.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 6.6
Samples: 4

Max nTPM: 8.8
Min nTPM: 4.4
Sample A Female 5.5
Sample B Female 8.8
Sample C Male 7.7
Sample D Male 4.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 4.4
Samples: 4

Max nTPM: 4.8
Min nTPM: 4.1
Sample A Male 4.8
Sample B Male 4.1
Sample C Female 4.1
Sample D Female 4.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.0
69540733 Antisense, RP_050426_02_C12, Mouse strain C57BL/6J (56 days, male) 0.0

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