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RBFOX3
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  • SUMMARY

  • TISSUE

  • BRAIN

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • RBFOX3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

116.574
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:17.5 nTPM
HPA Brain:55.7 nTPM
GTEx:17.5 nTPM
Pig:14.2 nTPM
Mouse:38.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB078782
Hypothalamus mean intensity 116.574
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 23.387
Periventricular hypothalamic nucleus 75.512
Supraoptic nucleus 74.885
Tuberal nucleus 38.352
Ventral tuberomammillary nucleus 59.094
Lateral preoptic area 59.610
Medial preoptic area 91.403
Suprachiasmatic nucleus 94.787
Paraventricular hypothalamic nucleus 116.574
Anterior hypothalamic area, central 89.989
Ventral medial hypothalamic nucleus 79.066
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 100.943
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 55.242
Dorsal medial hypothalamic nucleus 79.434
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 40.9
1961 Female, age 42, unknown 46.4
2226 Male, age 75, left hemisphere 35.3
Dorsomedial nucleus
nTPM: 28.4
2017 Female, age 42, unknown 48.5
2041 Female, age 72, unknown 19.1
1989 Male, age 62, unknown 17.7
Lateral hypothalamic area
nTPM: 40.7
2228 Male, age 66, unknown 49.9
1791 Male, age 80, right hemisphere 42.1
2271 Male, age 75, both hemispheres 39.0
2412 Male, age 62, unknown 31.7
Mammillary body
nTPM: 46.8
1923 Female, age 72, unknown 66.0
2413 Male, age 66, unknown 56.6
1834 Female, age 42, unknown 48.0
1948 Female, age 72, unknown 47.7
1945 Male, age 80, right hemisphere 15.4
Paraventricular nucleus
nTPM: 38.8
2700 Male, age 62, unknown 38.8
Preoptic area
nTPM: 41.1
1907 Male, age 80, right hemisphere 48.2
1861 Female, age 42, unknown 41.3
2414 Female, age 72, unknown 33.8
Supraoptic nucleus
nTPM: 23.9
2835 Female, age 72, unknown 34.2
1894 Female, age 72, unknown 21.7
2043 Male, age 62, unknown 15.9
Ventromedial nucleus
nTPM: 55.7
1982 Female, age 72, unknown 58.9
1822 Female, age 42, unknown 52.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 17.5
Samples: 257

Max nTPM: 91.9
Min nTPM: 1.0
Std nTPM: 11.1
Median nTPM: 15.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 91.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 79.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 76.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 67.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 52.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 48.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 47.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 46.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 40.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 39.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 36.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 35.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 35.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 35.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 32.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 28.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 28.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 28.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 28.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 28.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 27.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 27.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 27.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 27.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 27.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 26.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 26.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 26.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 26.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 25.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 25.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 24.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 24.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 24.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 24.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 24.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 24.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 24.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 24.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 23.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 23.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 23.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 23.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 23.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 23.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 23.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 23.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 23.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 22.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 22.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 22.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 22.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 22.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 22.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 22.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 22.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 22.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 21.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 21.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 21.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 21.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 21.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 21.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 21.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 21.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 20.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 20.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 20.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 20.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 20.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 20.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 20.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 20.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 20.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 20.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 20.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 20.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 20.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 19.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 19.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 19.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 19.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 19.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 19.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 19.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 19.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 19.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 19.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 19.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 18.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 18.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 18.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 18.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 18.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 18.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 18.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 18.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 18.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 18.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 18.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 18.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 17.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 17.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 17.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 17.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 17.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 17.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 17.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 17.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 17.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 17.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 17.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 17.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 17.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 17.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 17.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 17.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 16.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 16.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 16.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 16.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 16.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 16.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 16.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 16.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 16.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 16.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 16.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 15.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 15.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 15.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 15.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 15.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 15.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 15.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 15.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 15.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 15.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 15.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 15.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 15.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 14.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 14.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 14.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 14.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 14.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 14.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 14.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 14.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 14.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 14.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 13.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 13.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 13.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 13.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 13.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 13.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 13.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 13.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 13.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 13.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 13.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 13.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 13.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 13.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 13.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 12.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 12.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 12.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 12.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 12.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 12.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 12.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 12.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 12.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 12.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 11.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 11.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 11.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 11.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 11.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 11.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 11.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 11.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 11.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 11.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 11.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 11.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 11.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 11.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 11.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 10.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 10.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 10.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 10.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 10.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 10.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 10.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 10.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 10.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 10.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 10.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 10.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 10.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 10.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 9.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 9.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 9.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 9.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 9.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 9.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 9.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 9.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 9.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 9.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 9.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 9.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 9.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 9.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 9.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 9.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 9.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 8.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 8.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 8.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 8.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 8.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 8.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 8.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 8.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 8.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 8.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 8.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 8.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 7.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 7.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 7.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 7.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 7.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 7.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 7.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 6.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 6.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 6.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 6.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 6.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 5.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 5.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 4.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 4.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 4.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 3.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 3.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 2.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 2.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 2.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 14.2
Samples: 4

Max nTPM: 21.3
Min nTPM: 9.7
Sample A Female 21.3
Sample B Female 14.1
Sample C Male 11.6
Sample D Male 9.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 38.7
Samples: 4

Max nTPM: 45.5
Min nTPM: 33.3
Sample A Male 45.5
Sample B Male 40.8
Sample C Female 33.3
Sample D Female 35.1

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