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  • TRAPPC2L
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:59.5 nTPM
HPA Brain:41.5 nTPM
GTEx:59.5 nTPM
Pig:58.9 nTPM
Mouse:33.7 nTPM
Allen mouse:1.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 27.5
2226 Male, age 75, left hemisphere 27.8
1961 Female, age 42, unknown 27.2
Dorsomedial nucleus
nTPM: 27.0
2041 Female, age 72, unknown 32.2
1989 Male, age 62, unknown 24.4
2017 Female, age 42, unknown 24.4
Lateral hypothalamic area
nTPM: 41.5
2228 Male, age 66, unknown 52.0
1791 Male, age 80, right hemisphere 45.8
2271 Male, age 75, both hemispheres 43.4
2412 Male, age 62, unknown 25.0
Mammillary body
nTPM: 30.3
1923 Female, age 72, unknown 43.4
1945 Male, age 80, right hemisphere 30.4
1948 Female, age 72, unknown 29.6
2413 Male, age 66, unknown 24.1
1834 Female, age 42, unknown 23.7
Paraventricular nucleus
nTPM: 23.3
2700 Male, age 62, unknown 23.3
Preoptic area
nTPM: 33.3
1907 Male, age 80, right hemisphere 43.8
1861 Female, age 42, unknown 30.4
2414 Female, age 72, unknown 25.6
Supraoptic nucleus
nTPM: 32.0
2043 Male, age 62, unknown 33.3
1894 Female, age 72, unknown 32.1
2835 Female, age 72, unknown 30.6
Ventromedial nucleus
nTPM: 30.1
1982 Female, age 72, unknown 37.2
1822 Female, age 42, unknown 23.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 59.5
Samples: 257

Max nTPM: 136.4
Min nTPM: 20.1
Std nTPM: 18.6
Median nTPM: 57.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 136.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 120.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 105.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 102.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 102.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 101.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 101.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 99.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 99.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 96.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 94.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 92.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 91.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 91.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 90.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 90.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 89.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 88.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 88.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 87.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 87.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 86.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 85.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 85.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 84.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 84.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 84.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 82.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 81.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 81.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 81.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 81.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 81.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 80.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 79.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 79.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 79.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 78.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 77.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 76.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 76.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 76.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 76.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 76.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 75.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 74.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 74.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 74.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 74.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 73.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 73.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 72.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 72.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 72.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 72.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 72.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 72.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 72.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 72.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 72.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 72.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 72.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 72.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 72.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 71.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 71.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 71.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 71.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 71.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 70.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 70.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 70.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 70.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 69.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 69.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 69.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 69.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 68.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 68.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 67.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 67.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 66.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 66.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 66.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 66.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 65.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 65.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 65.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 64.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 64.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 64.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 64.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 64.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 64.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 64.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 63.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 63.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 63.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 63.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 63.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 63.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 63.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 63.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 62.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 62.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 62.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 61.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 61.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 61.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 61.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 61.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 61.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 60.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 60.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 60.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 60.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 59.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 59.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 59.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 58.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 58.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 58.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 58.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 57.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 57.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 57.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 57.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 57.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 57.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 57.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 57.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 57.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 56.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 56.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 56.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 56.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 56.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 56.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 55.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 55.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 55.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 55.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 55.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 55.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 55.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 54.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 54.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 53.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 53.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 53.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 53.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 53.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 53.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 53.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 52.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 52.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 52.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 52.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 52.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 52.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 52.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 52.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 52.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 51.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 51.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 51.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 51.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 51.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 51.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 51.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 50.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 50.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 50.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 50.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 50.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 49.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 49.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 49.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 49.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 49.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 49.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 48.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 48.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 48.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 47.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 47.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 47.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 47.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 47.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 47.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 47.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 46.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 46.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 46.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 46.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 46.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 46.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 46.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 46.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 46.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 46.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 45.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 45.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 45.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 45.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 45.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 44.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 44.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 44.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 43.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 43.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 43.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 42.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 42.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 42.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 41.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 41.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 41.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 40.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 40.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 40.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 40.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 40.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 39.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 39.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 39.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 39.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 39.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 38.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 38.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 37.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 37.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 37.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 36.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 35.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 35.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 34.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 33.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 33.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 33.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 32.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 32.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 31.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 30.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 29.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 29.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 29.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 29.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 28.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 27.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 26.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 25.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 25.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 22.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 21.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 20.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 20.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 58.9
Samples: 4

Max nTPM: 81.2
Min nTPM: 43.5
Sample A Female 81.2
Sample B Female 52.1
Sample C Male 58.8
Sample D Male 43.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 33.7
Samples: 4

Max nTPM: 36.7
Min nTPM: 31.2
Sample A Male 34.1
Sample B Male 36.7
Sample C Female 31.2
Sample D Female 32.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.7
68744630 Antisense, RP_050208_01_C08, Mouse strain C57BL/6J (56 days, male) 1.7

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