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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • TUBA1A
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:494.6 nTPM
GTEx:668.9 nTPM
FANTOM5:1522.2 Scaled Tags Per Million
Macaque:0.0 nTPM
Pig:602.4 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

494.6
Sample id Sample description nTPM
Putamen
nTPM: 494.6
2482 Female, age 94, left hemisphere 724.6
1937 Female, age 91, right hemisphere 545.1
1829 Male, age 74, unknown 494.9
2466 Female, age 79, unknown 485.8
2647 Male, age 75, left hemisphere 430.6
1838 Male, age 80, right hemisphere 412.5
2489 Female, age 72, unknown 368.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

668.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 668.9
Samples: 254

Max nTPM: 2236.2
Min nTPM: 277.7
Std nTPM: 234.8
Median nTPM: 636.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 2236.2
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 2091.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1488.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 1271.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1211.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1175.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1115.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 1100.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1078.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1072.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 1061.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1052.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1041.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1028.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1026.4
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 994.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 991.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 986.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 981.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 976.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 971.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 961.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 952.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 933.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 916.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 910.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 909.2
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 903.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 899.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 895.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 895.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 886.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 883.8
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 881.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 879.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 871.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 869.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 863.8
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 845.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 841.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 839.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 835.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 835.6
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 834.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 831.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 830.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 830.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 830.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 821.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 818.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 817.1
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 803.5
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 802.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 796.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 790.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 785.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 783.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 783.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 782.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 781.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 779.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 777.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 771.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 770.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 766.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 766.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 764.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 764.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 762.9
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 761.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 757.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 748.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 744.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 743.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 741.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 740.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 738.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 735.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 733.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 733.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 732.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 732.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 732.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 729.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 728.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 727.9
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 727.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 723.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 723.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 721.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 720.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 720.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 719.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 718.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 713.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 710.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 710.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 704.6
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 700.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 699.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 694.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 694.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 692.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 691.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 687.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 687.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 687.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 682.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 680.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 675.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 674.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 665.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 663.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 658.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 656.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 655.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 652.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 650.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 647.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 645.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 644.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 644.6
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 643.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 643.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 641.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 639.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 636.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 635.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 633.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 631.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 630.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 629.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 623.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 620.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 618.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 618.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 616.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 615.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 614.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 613.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 610.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 608.7
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 608.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 600.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 600.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 600.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 598.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 598.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 596.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 595.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 595.4
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 592.9
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 591.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 590.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 587.9
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 587.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 581.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 579.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 579.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 577.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 576.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 572.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 571.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 570.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 568.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 566.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 566.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 565.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 564.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 559.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 558.0
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 557.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 555.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 545.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 544.0
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 540.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 538.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 538.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 536.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 534.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 534.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 531.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 530.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 529.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 529.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 528.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 528.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 522.4
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 522.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 514.7
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 513.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 513.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 513.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 511.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 510.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 510.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 506.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 505.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 505.2
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 502.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 498.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 495.8
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 494.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 493.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 492.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 489.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 488.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 487.7
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 474.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 472.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 472.4
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 471.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 470.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 469.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 468.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 465.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 462.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 460.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 457.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 455.0
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 446.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 445.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 440.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 439.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 439.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 438.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 433.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 433.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 431.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 431.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 429.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 429.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 424.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 416.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 410.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 407.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 401.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 400.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 382.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 381.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 379.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 374.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 374.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 374.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 352.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 350.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 343.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 342.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 337.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 337.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 332.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 319.4
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 307.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 277.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1522.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 1522.2
FF:10176-103C5 60 years, female 1522.2

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Macaque sample Sample description nTPM
Putamen
nTPM: 0.0
Samples: 2

Max nTPM: 0.0
Min nTPM: 0.0
Sample A 0.0
Sample B 0.0

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

602.4
Pig sample Sample description nTPM
Putamen
nTPM: 602.4
Samples: 3

Max nTPM: 699.3
Min nTPM: 453.4
Sample B Female 453.4
Sample C Male 654.4
Sample D Male 699.3

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