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  • TISSUE

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  • EEF2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:517.4 nTPM
HPA Brain:624.4 nTPM
GTEx:517.4 nTPM
Pig:482.4 nTPM
Mouse:688.3 nTPM
Allen mouse:23.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

624.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 548.7
1961 Female, age 42, unknown 592.5
2226 Male, age 75, left hemisphere 504.9
Dorsomedial nucleus
nTPM: 581.9
1989 Male, age 62, unknown 629.5
2017 Female, age 42, unknown 609.4
2041 Female, age 72, unknown 506.7
Lateral hypothalamic area
nTPM: 618.9
2412 Male, age 62, unknown 636.7
1791 Male, age 80, right hemisphere 632.0
2271 Male, age 75, both hemispheres 617.3
2228 Male, age 66, unknown 589.6
Mammillary body
nTPM: 624.4
2413 Male, age 66, unknown 669.2
1923 Female, age 72, unknown 658.8
1834 Female, age 42, unknown 625.3
1948 Female, age 72, unknown 607.0
1945 Male, age 80, right hemisphere 561.7
Paraventricular nucleus
nTPM: 495.0
2700 Male, age 62, unknown 495.0
Preoptic area
nTPM: 558.0
1861 Female, age 42, unknown 593.4
1907 Male, age 80, right hemisphere 556.6
2414 Female, age 72, unknown 523.9
Supraoptic nucleus
nTPM: 570.4
2835 Female, age 72, unknown 646.4
2043 Male, age 62, unknown 557.8
1894 Female, age 72, unknown 507.1
Ventromedial nucleus
nTPM: 555.5
1982 Female, age 72, unknown 593.0
1822 Female, age 42, unknown 517.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

517.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 517.4
Samples: 257

Max nTPM: 1153.9
Min nTPM: 252.7
Std nTPM: 138.3
Median nTPM: 488.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 1153.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 980.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 955.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 927.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 884.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 859.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 836.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 822.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 815.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 799.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 783.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 779.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 778.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 777.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 769.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 764.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 760.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 757.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 738.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 722.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 707.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 704.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 704.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 692.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 691.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 684.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 683.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 679.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 679.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 679.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 677.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 673.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 672.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 671.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 669.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 667.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 665.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 664.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 663.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 657.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 655.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 650.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 647.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 645.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 642.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 636.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 634.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 634.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 634.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 633.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 632.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 631.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 630.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 625.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 621.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 619.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 616.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 612.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 611.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 607.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 607.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 607.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 607.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 604.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 604.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 603.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 600.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 598.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 597.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 595.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 591.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 590.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 586.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 580.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 577.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 575.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 575.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 572.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 572.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 572.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 566.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 562.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 558.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 558.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 556.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 556.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 549.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 545.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 545.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 544.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 541.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 541.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 537.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 536.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 534.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 534.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 533.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 532.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 531.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 529.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 527.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 526.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 526.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 525.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 524.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 521.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 521.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 521.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 521.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 516.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 515.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 515.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 514.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 513.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 512.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 511.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 511.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 511.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 508.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 507.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 505.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 500.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 498.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 497.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 494.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 494.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 493.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 488.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 488.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 486.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 485.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 482.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 482.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 481.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 480.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 480.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 478.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 476.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 476.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 472.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 470.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 469.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 468.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 466.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 465.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 464.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 464.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 463.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 462.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 458.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 458.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 457.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 456.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 456.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 454.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 454.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 453.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 451.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 449.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 449.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 448.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 448.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 447.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 447.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 445.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 444.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 444.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 443.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 443.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 443.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 442.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 441.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 440.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 440.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 439.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 437.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 435.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 433.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 432.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 432.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 431.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 431.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 431.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 430.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 429.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 429.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 429.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 429.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 428.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 426.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 425.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 425.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 422.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 420.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 418.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 417.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 414.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 414.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 410.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 409.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 409.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 408.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 408.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 406.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 406.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 404.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 404.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 403.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 401.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 401.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 399.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 399.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 397.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 395.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 394.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 390.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 388.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 387.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 386.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 385.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 385.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 383.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 383.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 382.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 381.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 377.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 377.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 376.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 375.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 368.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 368.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 368.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 363.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 361.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 361.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 359.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 359.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 357.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 355.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 354.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 352.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 352.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 351.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 346.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 346.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 340.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 330.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 327.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 327.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 322.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 305.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 299.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 297.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 286.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 286.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 269.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 252.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

482.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 482.4
Samples: 4

Max nTPM: 614.9
Min nTPM: 355.6
Sample A Female 614.9
Sample B Female 476.2
Sample C Male 482.8
Sample D Male 355.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

688.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 688.3
Samples: 4

Max nTPM: 793.1
Min nTPM: 611.5
Sample A Male 707.6
Sample B Male 793.1
Sample C Female 611.5
Sample D Female 640.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

23.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 23.6
308055136 Antisense, RP_140710_01_A05, Mouse strain C57BL/6J (56 days, male) 27.0
67936204 Antisense, RP_041102_01_B02, Mouse strain C57BL/6J (56 days, male) 20.2

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