HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:58.7 nTPM
HPA Brain:44.0 nTPM
GTEx:58.7 nTPM
FANTOM5:37.4 Scaled Tags Per Million
Pig:31.2 nTPM
Mouse:15.0 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047599
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 44.0
Sample id Sample description nTPM
Hippocampus
nTPM: 44.0
1855 Male, age 76, left hemisphere 51.4
2621 Female, age 67, right hemisphere 46.4
1898 Male, age 80, left hemisphere 45.3
2529 Female, age 94, left hemisphere 43.9
2148 Female, age 91, left hemisphere 39.4
1911 Female, age 85, right hemisphere 37.6
Dentate gyrus
nTPM: 40.3
2530 Female, age 94, left hemisphere 53.0
2010 Male, age 76, both hemispheres 48.1
2246 Female, age 85, both hemispheres 37.6
2531 Female, age 67, both hemispheres 36.6
2528 Male, age 74, both hemispheres 36.0
1927 Female, age 91, both hemispheres 30.7
Entorhinal gyrus
nTPM: 35.8
2117 Female, age 91, right hemisphere 46.5
1938 Female, age 85, left hemisphere 42.9
1787 Male, age 76, left hemisphere 35.4
2764 Male, age 80, right hemisphere 32.7
2686 Male, age 75, right hemisphere 29.6
2613 Female, age 94, left hemisphere 27.6
Hippocampus, CA1
nTPM: 37.8
2527 Male, age 74, both hemispheres 42.9
1873 Female, age 85, both hemispheres 41.1
2045 Male, age 76, both hemispheres 38.4
2082 Female, age 91, right hemisphere 35.6
2749 Male, age 80, left hemisphere 30.8
Hippocampus, CA2
nTPM: 37.9
2249 Male, age 74, both hemispheres 42.0
2437 Female, age 94, left hemisphere 39.8
1940 Female, age 85, left hemisphere 38.4
2113 Female, age 91, right hemisphere 37.6
1963 Male, age 80, left hemisphere 36.3
1892 Male, age 76, both hemispheres 33.5
Hippocampus, CA3
nTPM: 34.8
2861 Female, age 67, both hemispheres 43.7
1891 Female, age 85, both hemispheres 36.5
1867 Male, age 76, both hemispheres 34.5
2620 Female, age 94, left hemisphere 33.5
2436 Male, age 74, both hemispheres 33.2
2137 Male, age 80, left hemisphere 27.7
Parahippocampal cortex
nTPM: 36.9
2692 Male, age 74, both hemispheres 46.7
2245 Female, age 91, both hemispheres 45.6
2532 Female, age 72, left hemisphere 40.2
1933 Female, age 85, both hemispheres 39.6
2250 Female, age 67, right hemisphere 39.4
2622 Female, age 67, right hemisphere 35.4
2018 Male, age 76, both hemispheres 35.1
1990 Female, age 91, right hemisphere 34.3
1850 Male, age 80, both hemispheres 27.6
2693 Female, age 94, both hemispheres 24.8
Perirhinal gyrus
nTPM: 27.6
1841 Female, age 85, right hemisphere 29.7
1847 Female, age 91, left hemisphere 29.1
2848 Male, age 76, right hemisphere 27.7
1794 Male, age 80, right hemisphere 26.4
2521 Female, age 94, right hemisphere 24.9
Subiculum
nTPM: 39.5
2042 Male, age 76, both hemispheres 47.9
2619 Male, age 74, both hemispheres 45.8
1977 Female, age 85, both hemispheres 37.5
2438 Female, age 94, left hemisphere 36.1
1901 Male, age 80, both hemispheres 35.2
2729 Female, age 91, right hemisphere 34.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 58.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.7
Samples: 255

Max nTPM: 153.7
Min nTPM: 21.0
Std nTPM: 20.7
Median nTPM: 55.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 153.7
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 143.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 123.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 121.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 119.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 119.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 115.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 113.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 111.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 110.9
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 107.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 37.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.4
FF:10153-102I9 76 years, female 57.2
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 31.2
Pig sample Sample description nTPM
Subiculum
nTPM: 24.4
Samples: 4

Max nTPM: 33.3
Min nTPM: 20.7
Sample A Female 33.3
Sample B Female 20.7
Sample C Male 21.5
Sample D Male 22.1
Dorsal hippocampus
nTPM: 31.2
Samples: 4

Max nTPM: 43.2
Min nTPM: 24.5
Sample A Female 43.2
Sample B Female 24.5
Sample C Male 31.1
Sample D Male 26.0
Entorhinal cortex
nTPM: 23.8
Samples: 4

Max nTPM: 25.9
Min nTPM: 19.6
Sample A Female 25.9
Sample B Female 24.0
Sample C Male 25.8
Sample D Male 19.6
Ventral hippocampus
nTPM: 27.3
Samples: 4

Max nTPM: 32.6
Min nTPM: 19.6
Sample A Female 25.5
Sample B Female 19.6
Sample C Male 32.6
Sample D Male 31.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 15.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.3
Samples: 4

Max nTPM: 15.9
Min nTPM: 11.8
Sample A Male 15.6
Sample B Male 15.9
Sample C Female 13.8
Sample D Female 11.8
Hippocampal formation
nTPM: 15.1
Samples: 4

Max nTPM: 18.3
Min nTPM: 11.5
Sample A Male 11.5
Sample B Male 16.5
Sample C Female 13.9
Sample D Female 18.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
68498974 Antisense, RP_050113_02_G02, Mouse strain C57BL/6J (56 days, male) 0.2

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