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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
230.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 209.0
1870
Female, age 42, unknown
258.9
1833
Male, age 53, unknown
237.1
1830
Male, age 51, unknown
224.3
2411
Female, age 72, unknown
221.3
2828
Female, age 72, unknown
216.8
2019
Male, age 18, unknown
201.5
1827
Male, age 72, unknown
193.6
2586
Male, age 75, left hemisphere
181.3
2666
Male, age 74, left hemisphere
178.6
2219
Male, age 76, both hemispheres
176.8
Dorsal raphe nucleus nTPM: 222.5
2016
Female, age 72, unknown
258.0
2750
Male, age 76, both hemispheres
227.6
1828
Male, age 53, unknown
216.7
2298
Female, age 72, unknown
213.4
2047
Male, age 72, unknown
196.8
Inferior colliculus nTPM: 206.7
1848
Female, age 42, unknown
218.5
2097
Female, age 72, unknown
211.5
1890
Male, age 53, unknown
204.5
2849
Male, age 72, unknown
192.3
Median raphe nucleus nTPM: 195.5
2220
Male, age 76, midline
195.5
Periaquaductal grey, anterior nTPM: 194.0
2502
Female, age 75, unknown
203.1
1947
Male, age 18, unknown
196.3
1795
Male, age 51, unknown
182.7
Periaquaductal grey, dorsal nTPM: 220.4
2850
Male, age 76, both hemispheres
247.3
2464
Female, age 72, unknown
217.7
1840
Male, age 53, unknown
208.6
1831
Male, age 72, unknown
208.1
Periaquaductal grey, lateral nTPM: 215.9
2140
Male, age 76, both hemispheres
234.6
2053
Male, age 18, unknown
222.9
2272
Male, age 74, both hemispheres
190.4
Pretectal area nTPM: 197.1
2316
Male, age 76, right hemisphere
228.8
2273
Male, age 74, both hemispheres
218.8
2224
Female, age 72, unknown
218.0
1815
Male, age 53, unknown
210.9
2667
Female, age 75, unknown
201.3
1817
Female, age 42, unknown
200.5
2825
Male, age 18, unknown
197.3
2407
Male, age 75, both hemispheres
182.0
1944
Female, age 72, unknown
180.3
1816
Male, age 51, unknown
167.8
2007
Male, age 72, unknown
163.0
Red nucleus nTPM: 230.1
1954
Female, age 42, unknown
275.5
1904
Male, age 53, unknown
268.1
1865
Male, age 51, unknown
261.5
1821
Female, age 72, unknown
252.5
2769
Male, age 72, unknown
248.6
2227
Male, age 72, unknown
245.8
2503
Female, age 72, unknown
244.5
2823
Male, age 76, right hemisphere
241.3
2785
Male, age 18, unknown
201.1
2725
Female, age 75, unknown
191.3
2588
Male, age 74, left hemisphere
177.3
2584
Male, age 75, left hemisphere
153.9
Substantia nigra nTPM: 206.8
2699
Male, age 18, unknown
260.8
2241
Male, age 72, unknown
222.1
2409
Female, age 72, unknown
218.8
2590
Female, age 75, unknown
216.5
1851
Male, age 51, unknown
210.7
1889
Female, age 72, unknown
204.3
2665
Male, age 74, both hemispheres
201.3
1916
Female, age 42, unknown
194.0
2583
Male, age 75, right hemisphere
177.6
1941
Male, age 53, unknown
161.6
Superior colliculus nTPM: 211.1
1913
Female, age 42, unknown
279.7
1995
Male, age 72, unknown
267.0
2668
Female, age 75, unknown
218.1
2587
Male, age 74, left hemisphere
203.5
1839
Male, age 51, unknown
203.0
1895
Male, age 76, right hemisphere
197.8
2087
Female, age 72, unknown
197.2
2664
Male, age 75, both hemispheres
186.5
2261
Male, age 18, unknown
180.6
1796
Male, age 53, unknown
177.7
Ventral tegmental area nTPM: 218.8
2021
Male, age 53, unknown
243.8
2223
Female, age 72, unknown
222.7
1942
Male, age 51, unknown
217.4
2410
Female, age 72, unknown
216.6
1915
Female, age 42, unknown
206.6
2218
Male, age 76, both hemispheres
205.6
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
209.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 209.6
Samples: 183
Max nTPM: 382.9
Min nTPM: 63.7
Std nTPM: 62.2
Median nTPM: 205.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
382.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
370.5
GTEX-1PWST-0011-R2b-SM-F3K5I
70-79 years, male
353.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
351.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
345.5
GTEX-1R9K4-0011-R2b-SM-G8LLF
60-69 years, male
342.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
340.0
GTEX-1117F-0011-R2b-SM-GI4VL
60-69 years, female
330.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
327.3
GTEX-15SHU-0011-R2a-SM-GPRXS
40-49 years, female
325.0
GTEX-1LSVX-0011-R2a-SM-G8OL9
60-69 years, male
323.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
322.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
310.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
308.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
306.8
GTEX-1N5O9-0011-R2a-SM-G8LM1
60-69 years, male
300.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
298.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
293.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
285.6
GTEX-1KWVE-0011-R2a-SM-G8OLX
30-39 years, male
284.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
283.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
280.7
GTEX-ZYY3-0011-R2a-SM-GNTB2
60-69 years, female
280.1
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
277.4
GTEX-1LKK1-0011-R2b-SM-G8OLT
50-59 years, female
270.9
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
270.6
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
270.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
269.7
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
269.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
267.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
265.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
264.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
264.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
264.3
GTEX-1MCQQ-0011-R2a-SM-F649V
60-69 years, male
264.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
260.6
GTEX-1KD5A-0011-R2b-SM-G9EPP
50-59 years, male
259.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
258.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
257.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
257.4
GTEX-1JMQJ-0011-R2a-SM-F6493
50-59 years, male
257.4
GTEX-1O9I2-0011-R2b-SM-F3K53
50-59 years, male
255.4
GTEX-1I19N-0011-R2b-SM-GPRYG
70-79 years, male
252.5
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
252.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
250.1
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
250.0
GTEX-1RDX4-0011-R2b-SM-F649Z
50-59 years, female
249.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
249.3
GTEX-1QMI2-0011-R2b-SM-F648R
60-69 years, male
248.4
GTEX-1192X-0011-R2b-SM-GI4VV
50-59 years, male
247.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
247.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
246.4
GTEX-16GPK-0011-R2a-SM-GRR1F
60-69 years, male
244.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
244.2
GTEX-1NV5F-0011-R2a-SM-G8LME
60-69 years, female
243.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
242.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
242.5
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
241.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
240.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
238.4
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
237.6
GTEX-1RQEC-0011-R2b-SM-EY5ZT
60-69 years, male
236.6
GTEX-1POEN-0011-R2b-SM-G8LLP
30-39 years, female
235.3
GTEX-1NV8Z-0011-R2b-SM-F648N
60-69 years, male
235.2
GTEX-13OVL-0011-R2b-SM-H65ZN
50-59 years, male
235.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
234.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
234.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
234.4
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
234.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
230.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
229.2
GTEX-1JJ6O-0011-R2a-SM-EY5ZO
60-69 years, male
228.7
GTEX-11TTK-0011-R2b-SM-GJ3PU
60-69 years, female
226.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
224.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
224.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
223.8
GTEX-1JMPZ-0011-R2a-SM-G8LLS
30-39 years, male
223.6
GTEX-1CB4J-0011-R2a-SM-9WG5N
60-69 years, male
223.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
220.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
217.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
215.6
GTEX-1JN1M-0011-R2b-SM-G9EPE
60-69 years, female
214.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
212.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
211.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
211.1
GTEX-1RQED-0011-R2a-SM-F3K5T
60-69 years, male
210.1
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
208.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
208.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
207.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
206.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
206.3
GTEX-1LG7Y-0011-R2b-SM-G8LMM
50-59 years, male
205.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
204.9
GTEX-ZAK1-0011-R2a-SM-GPRX1
50-59 years, female
204.3
GTEX-1R9PO-0011-R2a-SM-F2TBH
60-69 years, female
203.6
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
203.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
202.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
197.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
197.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
197.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
196.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
195.5
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
194.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
193.2
GTEX-1HBPH-0011-R2a-SM-GQ1DS
40-49 years, female
191.8
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
191.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
190.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
189.6
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
187.8
GTEX-12696-0011-R2b-SM-GHWPY
60-69 years, male
187.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
187.0
GTEX-1PPGY-0011-R2b-SM-F33YW
60-69 years, male
186.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
186.5
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
185.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
185.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
180.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
180.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
179.9
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
179.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
179.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
178.8
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
178.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
177.5
GTEX-1KD4Q-0011-R2a-SM-F649I
40-49 years, male
177.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
176.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
175.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
173.0
GTEX-ZAJG-0011-R2a-SM-GNTAX
50-59 years, female
172.9
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
172.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
171.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
170.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
167.5
GTEX-1IDJH-0011-R2a-SM-GPI9D
70-79 years, male
167.1
GTEX-1P4AB-0011-R2a-SM-F649K
50-59 years, male
166.7
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
165.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
165.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
165.1
GTEX-11NUK-0011-R2a-SM-GINAO
50-59 years, male
162.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
162.8
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
161.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
160.8
GTEX-RN5K-0011-R2A-SM-GQ1CA
50-59 years, female
160.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
158.3
GTEX-1N2EF-0011-R2b-SM-F6482
60-69 years, male
154.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
153.8
GTEX-1MJK2-0011-R2b-SM-EXUS5
50-59 years, male
153.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
153.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
150.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
150.0
GTEX-15G19-0011-R2b-SM-H6Q7S
60-69 years, male
149.7
GTEX-1N2EE-0011-R2a-SM-F649F
60-69 years, male
148.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
148.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
147.3
GTEX-13OW7-0011-R2b-SM-H6Q8E
50-59 years, male
147.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
145.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
143.5
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
142.5
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
140.8
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
140.3
GTEX-111FC-0011-R2a-SM-GIN8S
60-69 years, male
138.2
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
138.2
GTEX-1PIIG-0011-R2b-SM-F648W
30-39 years, male
137.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
137.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
136.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
135.2
GTEX-ZZPT-0011-R2a-SM-GNTB1
50-59 years, male
132.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
131.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
131.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
128.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
127.7
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
125.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
123.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
121.9
GTEX-117XS-0011-R2b-SM-GI4VT
60-69 years, male
118.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
117.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
115.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
110.3
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
99.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
94.8
GTEX-X4EP-0011-R2B-SM-3P625
60-69 years, female
94.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
92.0
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
79.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
63.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
153.4
Pig sample
Sample description
nTPM
Substantia nigra nTPM: 151.5
Samples: 4
Max nTPM: 177.0
Min nTPM: 133.4
Sample A
Female
157.8
Sample B
Female
133.4
Sample C
Male
137.8
Sample D
Male
177.0
Midbrain nTPM: 153.4
Samples: 4
Max nTPM: 251.6
Min nTPM: 93.2
Sample A
Female
251.6
Sample B
Female
162.6
Sample C
Male
106.3
Sample D
Male
93.2
Periaqueductal gray nTPM: 134.3
Samples: 3
Max nTPM: 149.2
Min nTPM: 125.3
Sample B
Female
149.2
Sample C
Male
128.4
Sample D
Male
125.3
Superior colliculi nTPM: 123.6
Samples: 4
Max nTPM: 141.6
Min nTPM: 109.8
Sample A
Female
141.6
Sample B
Female
114.9
Sample C
Male
109.8
Sample D
Male
128.1
MIDBRAIN - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
16.1
Mouse sample
Sample description
nTPM
Midbrain nTPM: 16.1
Samples: 4
Max nTPM: 20.4
Min nTPM: 12.0
Sample A
Male
16.1
Sample B
Male
15.8
Sample C
Female
20.4
Sample D
Female
12.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.