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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
230.9
nTPM
FANTOM5:
199.4
Scaled Tags Per Million
Pig:
126.2
nTPM
Allen mouse:
0.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
230.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 215.2
2301
Female, age 85, both hemispheres
229.9
2090
Male, age 80, both hemispheres
226.0
2188
Female, age 91, both hemispheres
222.8
1984
Male, age 76, both hemispheres
181.9
Dorsal cochlear nucleus nTPM: 218.3
2378
Male, age 80, both hemispheres
242.6
2802
Male, age 74, right hemisphere
220.9
2370
Male, age 61, both hemispheres
214.1
2058
Male, age 76, both hemispheres
209.1
2187
Female, age 91, both hemispheres
204.6
Dorsal tegmental nucleus nTPM: 213.1
1936
Male, age 76, left hemisphere
218.9
2326
Male, age 74, both hemispheres
217.8
2358
Male, age 61, both hemispheres
217.7
2083
Male, age 80, both hemispheres
197.9
Dorsolateral tegmental area nTPM: 217.0
2337
Male, age 61, both hemispheres
257.2
2751
Female, age 85, both hemispheres
246.9
2654
Male, age 80, both hemispheres
212.4
2360
Male, age 74, both hemispheres
193.4
2141
Male, age 76, both hemispheres
175.1
Kolliker-Fuse nucleus nTPM: 215.6
2315
Male, age 76, right hemisphere
278.4
2793
Female, age 91, left hemisphere
191.4
2163
Male, age 80, both hemispheres
177.1
Lateral lemniscal nuclei nTPM: 170.8
2746
Female, age 85, left hemisphere
182.9
2320
Female, age 91, left hemisphere
181.2
2036
Male, age 80, both hemispheres
164.6
2453
Male, age 74, right hemisphere
163.0
2169
Male, age 76, both hemispheres
162.3
Lateral parabrachial nucleus nTPM: 230.9
2792
Male, age 76, both hemispheres
316.1
2013
Male, age 80, both hemispheres
227.4
2790
Male, age 61, both hemispheres
195.7
2139
Female, age 85, right hemisphere
184.3
Lateral vestibular nucleus nTPM: 199.4
2311
Male, age 80, both hemispheres
218.3
2184
Male, age 76, both hemispheres
180.4
Locus coeruleus nTPM: 173.1
2788
Male, age 74, unknown
189.2
2317
Female, age 72, unknown
188.6
2720
Male, age 74, both hemispheres
177.7
2162
Male, age 80, both hemispheres
175.6
1980
Male, age 76, both hemispheres
164.9
2014
Male, age 55, unknown
161.5
2123
Female, age 91, both hemispheres
154.7
Medial parabrachial nucleus nTPM: 199.2
2170
Female, age 91, both hemispheres
207.2
2854
Male, age 80, both hemispheres
204.2
2463
Female, age 85, right hemisphere
202.1
2786
Male, age 76, both hemispheres
196.2
2156
Male, age 61, both hemispheres
186.6
Medial periolivary nuclei nTPM: 186.5
2791
Male, age 74, right hemisphere
225.5
2081
Male, age 80, both hemispheres
207.8
2458
Female, age 91, both hemispheres
179.7
2063
Male, age 76, both hemispheres
173.6
2171
Female, age 85, both hemispheres
145.9
Motor facial nucleus nTPM: 183.0
2365
Male, age 74, right hemisphere
208.6
2795
Female, age 91, both hemispheres
192.4
2697
Female, age 85, both hemispheres
191.4
2126
Male, age 61, both hemispheres
190.9
2062
Male, age 76, both hemispheres
161.6
2327
Male, age 80, both hemispheres
153.0
Motor trigeminal nucleus nTPM: 174.6
2309
Male, age 76, both hemispheres
188.1
2335
Male, age 61, both hemispheres
178.5
2079
Male, age 80, both hemispheres
171.5
2560
Male, age 74, both hemispheres
168.1
2321
Female, age 91, both hemispheres
166.8
Nuclei of the trapezoid body nTPM: 171.8
2368
Female, age 91, both hemispheres
189.7
2166
Male, age 80, both hemispheres
183.3
1983
Male, age 76, both hemispheres
181.1
2159
Male, age 61, both hemispheres
154.4
2735
Female, age 85, both hemispheres
150.5
Nucleus raphe magnus nTPM: 163.4
2051
Male, age 76, both hemispheres
190.4
2455
Male, age 74, both hemispheres
187.6
2328
Male, age 80, both hemispheres
181.8
2459
Female, age 91, both hemispheres
168.0
2160
Male, age 61, both hemispheres
133.9
2172
Female, age 85, both hemispheres
118.6
Paramedian reticular nucleus nTPM: 200.8
2052
Male, age 76, both hemispheres
245.8
2057
Male, age 80, both hemispheres
203.0
2313
Male, age 61, both hemispheres
177.7
2050
Female, age 85, both hemispheres
176.5
Pedunculopontine tegmental nucleus nTPM: 220.7
2338
Male, age 61, both hemispheres
247.6
2334
Male, age 80, both hemispheres
212.8
1921
Female, age 85, both hemispheres
201.6
Pontine nuclei nTPM: 176.7
2319
Female, age 91, both hemispheres
211.2
2109
Female, age 72, unknown
192.3
2454
Male, age 74, left hemisphere
190.6
2115
Male, age 80, left hemisphere
190.2
1968
Male, age 76, left hemisphere
177.1
1863
Male, age 55, unknown
174.9
2727
Male, age 61, right hemisphere
148.5
2787
Female, age 85, both hemispheres
128.5
Pontine raphe nucleus nTPM: 180.0
2853
Male, age 76, midline
187.5
2122
Female, age 85, midline
172.5
Posteroventral cochlear nucleus nTPM: 226.9
2341
Male, age 80, both hemispheres
270.0
2135
Female, age 91, both hemispheres
247.1
2070
Male, age 76, both hemispheres
218.0
2371
Male, age 61, both hemispheres
217.8
2752
Female, age 85, both hemispheres
181.4
Principal sensory trigeminal nucleus nTPM: 174.8
2367
Female, age 91, left hemisphere
199.5
2324
Male, age 76, both hemispheres
196.5
2008
Male, age 80, left hemisphere
160.2
2158
Male, age 61, both hemispheres
142.9
Reticular pontine nucleus, caudal nTPM: 177.8
2092
Male, age 76, both hemispheres
206.2
2559
Male, age 74, both hemispheres
184.1
2457
Female, age 91, both hemispheres
179.4
2332
Male, age 80, right hemisphere
141.3
Reticular pontine nucleus, oral nTPM: 203.5
1939
Male, age 80, both hemispheres
223.6
2167
Male, age 76, both hemispheres
211.6
2366
Female, age 91, both hemispheres
202.2
2361
Male, age 74, both hemispheres
193.3
2012
Female, age 85, both hemispheres
186.8
Reticulotegmental nucleus nTPM: 181.5
2322
Female, age 91, both hemispheres
192.4
2333
Male, age 80, both hemispheres
190.1
2452
Male, age 74, both hemispheres
178.4
2325
Male, age 76, both hemispheres
165.3
Spinal trigeminal nucleus, oral nTPM: 185.9
1978
Male, age 76, both hemispheres
205.8
2164
Male, age 80, both hemispheres
176.1
2737
Female, age 85, both hemispheres
175.8
Subcoeruleus area nTPM: 201.9
2369
Female, age 85, left hemisphere
264.9
2451
Male, age 74, both hemispheres
205.5
1958
Male, age 80, both hemispheres
196.0
2089
Male, age 76, left hemisphere
176.2
2323
Female, age 91, left hemisphere
167.2
Superior olive nTPM: 188.3
2020
Male, age 76, both hemispheres
220.9
2364
Male, age 74, right hemisphere
217.9
2329
Male, age 80, right hemisphere
174.9
1875
Female, age 85, both hemispheres
166.8
2561
Female, age 91, both hemispheres
161.2
Ventral periolivary nuclei nTPM: 178.8
2023
Male, age 76, both hemispheres
229.8
2165
Male, age 80, both hemispheres
170.1
2130
Female, age 85, both hemispheres
158.8
2794
Female, age 91, left hemisphere
156.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 199.7
2359
Male, age 61, both hemispheres
238.0
1959
Male, age 76, both hemispheres
204.2
2840
Female, age 85, both hemispheres
200.2
2161
Male, age 80, both hemispheres
195.1
2456
Female, age 91, both hemispheres
191.3
2449
Male, age 74, both hemispheres
169.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
126.2
Pig sample
Sample description
nTPM
Pons nTPM: 126.2
Samples: 4
Max nTPM: 146.5
Min nTPM: 109.6
Sample A
Female
124.4
Sample B
Female
109.6
Sample C
Male
124.4
Sample D
Male
146.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.