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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:91.9 nTPM
HPA Brain:126.6 nTPM
GTEx:91.9 nTPM
Pig:110.5 nTPM
Mouse:178.7 nTPM
Allen mouse:21.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 126.1
2226 Male, age 75, left hemisphere 142.1
1961 Female, age 42, unknown 110.0
Dorsomedial nucleus
nTPM: 104.1
2041 Female, age 72, unknown 123.0
1989 Male, age 62, unknown 96.4
2017 Female, age 42, unknown 93.0
Lateral hypothalamic area
nTPM: 120.6
2228 Male, age 66, unknown 158.4
2271 Male, age 75, both hemispheres 113.7
1791 Male, age 80, right hemisphere 113.4
2412 Male, age 62, unknown 97.0
Mammillary body
nTPM: 112.6
1923 Female, age 72, unknown 153.3
1948 Female, age 72, unknown 110.2
2413 Male, age 66, unknown 108.4
1834 Female, age 42, unknown 99.5
1945 Male, age 80, right hemisphere 91.7
Paraventricular nucleus
nTPM: 113.8
2700 Male, age 62, unknown 113.8
Preoptic area
nTPM: 105.3
1907 Male, age 80, right hemisphere 114.6
1861 Female, age 42, unknown 100.8
2414 Female, age 72, unknown 100.4
Supraoptic nucleus
nTPM: 103.4
2835 Female, age 72, unknown 113.3
1894 Female, age 72, unknown 109.1
2043 Male, age 62, unknown 87.7
Ventromedial nucleus
nTPM: 126.6
1982 Female, age 72, unknown 139.9
1822 Female, age 42, unknown 113.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 91.9
Samples: 257

Max nTPM: 343.9
Min nTPM: 40.9
Std nTPM: 35.6
Median nTPM: 86.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 343.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 285.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 233.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 218.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 199.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 188.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 175.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 167.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 163.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 158.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 157.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 154.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 151.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 150.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 147.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 146.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 143.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 142.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 137.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 134.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 134.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 131.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 130.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 130.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 128.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 128.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 124.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 123.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 122.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 121.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 120.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 119.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 118.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 118.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 118.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 116.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 115.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 114.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 114.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 114.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 113.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 112.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 112.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 112.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 112.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 111.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 111.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 110.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 110.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 110.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 109.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 109.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 109.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 108.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 108.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 108.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 108.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 107.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 106.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 106.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 106.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 105.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 105.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 105.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 105.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 104.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 104.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 104.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 104.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 103.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 103.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 102.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 102.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 102.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 101.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 101.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 101.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 100.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 100.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 100.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 99.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 98.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 98.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 98.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 98.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 98.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 98.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 97.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 96.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 96.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 96.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 96.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 96.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 95.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 95.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 95.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 95.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 95.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 94.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 94.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 93.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 92.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 92.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 91.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 90.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 90.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 90.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 90.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 89.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 89.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 89.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 89.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 89.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 89.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 89.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 88.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 88.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 88.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 88.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 88.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 88.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 87.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 87.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 87.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 87.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 87.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 87.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 87.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 86.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 85.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 85.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 85.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 84.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 84.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 84.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 84.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 84.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 83.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 83.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 83.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 83.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 83.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 82.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 82.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 82.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 82.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 82.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 82.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 82.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 82.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 81.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 81.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 80.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 80.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 80.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 79.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 79.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 78.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 78.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 78.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 78.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 78.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 78.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 77.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 77.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 77.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 77.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 77.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 77.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 77.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 76.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 76.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 76.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 75.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 75.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 75.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 74.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 74.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 74.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 74.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 74.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 72.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 72.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 72.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 72.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 71.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 71.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 70.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 70.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 69.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 68.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 68.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 68.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 68.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 68.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 67.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 67.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 67.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 67.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 66.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 66.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 66.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 66.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 66.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 66.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 65.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 65.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 65.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 65.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 65.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 65.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 64.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 64.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 64.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 63.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 63.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 63.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 63.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 63.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 61.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 61.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 60.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 60.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 59.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 59.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 58.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 58.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 58.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 58.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 57.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 57.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 56.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 55.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 55.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 55.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 55.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 54.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 54.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 53.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 53.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 53.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 52.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 52.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 52.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 51.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 51.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 51.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 50.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 49.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 49.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 49.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 49.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 48.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 48.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 47.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 46.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 40.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 110.5
Samples: 4

Max nTPM: 144.1
Min nTPM: 92.2
Sample A Female 144.1
Sample B Female 104.7
Sample C Male 100.8
Sample D Male 92.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

178.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 178.7
Samples: 4

Max nTPM: 194.5
Min nTPM: 163.3
Sample A Male 163.3
Sample B Male 173.4
Sample C Female 194.5
Sample D Female 183.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

21.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 21.7
413807 Antisense, RP_040809_01_F06, Mouse strain C57BL/6J (56 days, male) 21.7

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