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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:72.5 nTPM
HPA Brain:169.4 nTPM
GTEx:72.5 nTPM
Pig:57.9 nTPM
Mouse:93.3 nTPM
Allen mouse:4.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

169.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 151.8
2226 Male, age 75, left hemisphere 154.0
1961 Female, age 42, unknown 149.6
Dorsomedial nucleus
nTPM: 113.9
1989 Male, age 62, unknown 134.3
2017 Female, age 42, unknown 107.6
2041 Female, age 72, unknown 100.0
Lateral hypothalamic area
nTPM: 135.2
2228 Male, age 66, unknown 154.9
2271 Male, age 75, both hemispheres 151.7
1791 Male, age 80, right hemisphere 147.5
2412 Male, age 62, unknown 86.9
Mammillary body
nTPM: 114.8
1923 Female, age 72, unknown 176.5
2413 Male, age 66, unknown 117.5
1834 Female, age 42, unknown 109.4
1948 Female, age 72, unknown 98.4
1945 Male, age 80, right hemisphere 72.2
Paraventricular nucleus
nTPM: 100.6
2700 Male, age 62, unknown 100.6
Preoptic area
nTPM: 102.7
1907 Male, age 80, right hemisphere 144.7
1861 Female, age 42, unknown 86.6
2414 Female, age 72, unknown 76.8
Supraoptic nucleus
nTPM: 74.8
2835 Female, age 72, unknown 89.6
1894 Female, age 72, unknown 78.9
2043 Male, age 62, unknown 56.0
Ventromedial nucleus
nTPM: 169.4
1982 Female, age 72, unknown 188.8
1822 Female, age 42, unknown 149.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 72.5
Samples: 257

Max nTPM: 501.1
Min nTPM: 7.9
Std nTPM: 49.5
Median nTPM: 66.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 501.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 406.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 325.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 314.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 211.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 160.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 139.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 137.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 136.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 131.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 128.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 128.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 126.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 122.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 118.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 118.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 117.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 116.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 115.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 113.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 110.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 109.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 109.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 107.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 106.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 106.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 106.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 106.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 106.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 104.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 104.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 102.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 100.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 100.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 99.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 99.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 99.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 99.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 97.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 97.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 95.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 94.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 93.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 92.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 92.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 92.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 91.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 91.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 91.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 90.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 89.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 88.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 87.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 87.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 87.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 86.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 86.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 86.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 86.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 86.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 85.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 84.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 84.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 84.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 83.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 83.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 83.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 83.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 83.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 83.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 82.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 82.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 82.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 82.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 81.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 81.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 81.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 81.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 80.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 79.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 79.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 79.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 79.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 79.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 79.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 78.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 78.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 78.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 78.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 78.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 77.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 77.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 77.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 77.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 76.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 76.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 75.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 74.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 74.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 74.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 74.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 74.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 74.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 74.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 74.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 73.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 73.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 72.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 72.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 72.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 71.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 71.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 71.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 69.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 69.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 69.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 69.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 69.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 68.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 68.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 68.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 68.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 67.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 67.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 66.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 66.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 66.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 66.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 66.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 65.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 65.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 65.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 64.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 64.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 64.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 64.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 64.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 63.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 63.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 63.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 63.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 63.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 62.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 62.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 62.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 62.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 62.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 61.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 61.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 61.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 60.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 60.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 60.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 60.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 59.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 59.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 59.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 59.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 59.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 58.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 58.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 58.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 58.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 57.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 57.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 56.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 56.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 55.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 54.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 54.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 53.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 53.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 53.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 52.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 52.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 52.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 52.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 51.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 51.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 50.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 50.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 49.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 49.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 49.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 49.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 49.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 49.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 48.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 48.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 48.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 48.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 47.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 46.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 46.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 46.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 46.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 45.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 45.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 45.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 45.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 44.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 44.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 44.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 44.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 43.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 43.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 43.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 43.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 43.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 42.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 42.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 42.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 42.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 42.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 41.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 40.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 40.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 39.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 39.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 39.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 39.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 38.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 38.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 37.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 37.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 36.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 36.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 34.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 33.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 33.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 32.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 30.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 29.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 29.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 29.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 29.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 29.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 28.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 28.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 28.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 28.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 26.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 26.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 26.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 25.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 25.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 24.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 22.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 18.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 18.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 18.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 18.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 17.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 17.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 17.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 15.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 7.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 57.9
Samples: 4

Max nTPM: 81.4
Min nTPM: 48.7
Sample A Female 81.4
Sample B Female 52.8
Sample C Male 48.7
Sample D Male 48.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 93.3
Samples: 4

Max nTPM: 98.2
Min nTPM: 88.7
Sample A Male 96.4
Sample B Male 98.2
Sample C Female 88.7
Sample D Female 89.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.6
71608455 Antisense, RP_050927_01_G05, Mouse strain C57BL/6J (56 days, male) 5.3
544328 Antisense, RP_040625_01_H06, Mouse strain C57BL/6J (56 days, male) 3.9

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