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  • TISSUE

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  • AHCYL1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:174.6 nTPM
HPA Brain:478.7 nTPM
GTEx:174.6 nTPM
Pig:194.1 nTPM
Mouse:186.8 nTPM
Allen mouse:10.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

478.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 233.1
1961 Female, age 42, unknown 240.1
2226 Male, age 75, left hemisphere 226.1
Dorsomedial nucleus
nTPM: 351.0
1989 Male, age 62, unknown 424.2
2041 Female, age 72, unknown 329.0
2017 Female, age 42, unknown 299.9
Lateral hypothalamic area
nTPM: 291.5
1791 Male, age 80, right hemisphere 519.7
2412 Male, age 62, unknown 258.0
2228 Male, age 66, unknown 202.9
2271 Male, age 75, both hemispheres 185.5
Mammillary body
nTPM: 340.6
1945 Male, age 80, right hemisphere 488.7
1834 Female, age 42, unknown 406.3
2413 Male, age 66, unknown 317.1
1923 Female, age 72, unknown 253.8
1948 Female, age 72, unknown 237.1
Paraventricular nucleus
nTPM: 242.1
2700 Male, age 62, unknown 242.1
Preoptic area
nTPM: 423.6
1907 Male, age 80, right hemisphere 533.5
1861 Female, age 42, unknown 468.1
2414 Female, age 72, unknown 269.2
Supraoptic nucleus
nTPM: 478.7
2043 Male, age 62, unknown 597.2
1894 Female, age 72, unknown 560.9
2835 Female, age 72, unknown 278.0
Ventromedial nucleus
nTPM: 275.1
1822 Female, age 42, unknown 276.5
1982 Female, age 72, unknown 273.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

174.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 174.6
Samples: 257

Max nTPM: 662.8
Min nTPM: 46.1
Std nTPM: 83.2
Median nTPM: 156.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 662.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 552.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 431.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 429.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 424.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 408.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 384.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 366.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 362.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 354.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 349.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 338.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 328.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 327.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 327.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 324.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 309.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 304.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 301.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 300.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 298.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 298.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 293.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 291.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 286.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 285.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 285.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 279.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 274.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 273.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 272.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 270.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 265.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 260.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 252.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 252.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 252.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 250.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 248.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 245.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 245.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 243.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 242.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 238.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 236.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 232.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 229.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 226.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 226.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 225.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 224.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 223.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 221.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 219.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 217.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 215.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 215.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 212.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 208.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 207.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 206.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 206.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 205.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 205.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 205.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 205.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 203.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 202.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 200.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 199.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 199.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 197.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 195.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 195.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 194.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 192.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 192.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 192.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 191.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 190.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 187.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 187.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 187.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 184.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 181.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 181.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 181.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 181.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 179.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 178.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 178.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 177.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 176.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 175.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 175.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 175.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 174.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 174.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 174.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 172.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 170.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 168.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 167.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 166.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 166.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 165.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 165.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 165.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 164.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 164.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 164.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 163.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 162.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 162.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 162.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 162.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 161.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 161.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 161.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 161.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 161.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 161.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 161.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 160.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 158.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 157.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 157.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 157.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 156.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 156.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 156.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 156.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 155.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 154.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 154.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 154.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 154.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 153.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 153.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 152.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 151.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 151.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 151.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 150.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 149.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 149.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 149.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 149.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 149.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 146.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 146.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 145.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 144.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 144.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 144.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 143.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 143.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 143.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 142.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 142.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 142.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 142.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 140.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 140.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 139.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 139.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 139.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 139.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 139.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 137.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 137.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 137.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 136.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 136.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 135.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 132.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 132.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 132.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 131.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 130.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 130.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 130.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 129.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 128.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 128.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 127.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 127.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 125.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 124.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 124.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 123.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 122.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 121.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 120.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 119.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 118.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 118.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 117.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 117.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 116.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 116.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 115.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 115.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 115.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 114.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 114.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 113.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 113.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 111.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 109.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 109.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 107.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 106.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 105.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 105.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 104.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 103.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 102.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 102.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 101.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 101.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 100.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 100.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 99.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 97.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 97.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 95.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 94.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 94.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 93.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 92.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 90.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 90.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 88.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 88.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 84.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 82.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 82.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 81.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 80.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 79.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 78.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 77.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 76.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 74.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 73.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 72.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 71.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 70.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 68.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 65.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 64.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 64.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 63.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 56.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 52.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 46.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

194.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 194.1
Samples: 4

Max nTPM: 240.9
Min nTPM: 125.5
Sample A Female 221.1
Sample B Female 240.9
Sample C Male 188.7
Sample D Male 125.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

186.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 186.8
Samples: 4

Max nTPM: 198.3
Min nTPM: 170.6
Sample A Male 170.6
Sample B Male 183.2
Sample C Female 195.2
Sample D Female 198.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.3
69838759 Antisense, RP_050324_01_G12, Mouse strain C57BL/6J (56 days, male) 10.3

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