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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
458.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 288.9
2828
Female, age 72, unknown
418.8
2586
Male, age 75, left hemisphere
377.3
1827
Male, age 72, unknown
341.1
1870
Female, age 42, unknown
320.8
1833
Male, age 53, unknown
284.5
2411
Female, age 72, unknown
268.8
2666
Male, age 74, left hemisphere
258.5
1830
Male, age 51, unknown
236.0
2019
Male, age 18, unknown
203.3
2219
Male, age 76, both hemispheres
180.0
Dorsal raphe nucleus nTPM: 409.5
2016
Female, age 72, unknown
531.4
1828
Male, age 53, unknown
461.3
2298
Female, age 72, unknown
417.6
2047
Male, age 72, unknown
377.3
2750
Male, age 76, both hemispheres
259.8
Inferior colliculus nTPM: 387.1
1848
Female, age 42, unknown
444.8
2849
Male, age 72, unknown
408.9
2097
Female, age 72, unknown
372.5
1890
Male, age 53, unknown
322.0
Median raphe nucleus nTPM: 274.8
2220
Male, age 76, midline
274.8
Periaquaductal grey, anterior nTPM: 337.4
1795
Male, age 51, unknown
357.7
2502
Female, age 75, unknown
337.6
1947
Male, age 18, unknown
317.1
Periaquaductal grey, dorsal nTPM: 458.4
1840
Male, age 53, unknown
554.5
2850
Male, age 76, both hemispheres
524.8
2464
Female, age 72, unknown
384.6
1831
Male, age 72, unknown
369.6
Periaquaductal grey, lateral nTPM: 427.4
2140
Male, age 76, both hemispheres
550.2
2053
Male, age 18, unknown
463.0
2272
Male, age 74, both hemispheres
268.9
Pretectal area nTPM: 361.6
2224
Female, age 72, unknown
459.5
2667
Female, age 75, unknown
458.9
1944
Female, age 72, unknown
406.5
2273
Male, age 74, both hemispheres
391.1
2316
Male, age 76, right hemisphere
376.4
1816
Male, age 51, unknown
374.2
2825
Male, age 18, unknown
365.8
1817
Female, age 42, unknown
342.9
1815
Male, age 53, unknown
304.0
2407
Male, age 75, both hemispheres
265.9
2007
Male, age 72, unknown
232.1
Red nucleus nTPM: 285.1
1821
Female, age 72, unknown
339.1
2503
Female, age 72, unknown
335.0
1954
Female, age 42, unknown
334.4
2769
Male, age 72, unknown
331.7
2227
Male, age 72, unknown
331.1
2823
Male, age 76, right hemisphere
308.3
2725
Female, age 75, unknown
298.8
1904
Male, age 53, unknown
263.7
1865
Male, age 51, unknown
254.8
2588
Male, age 74, left hemisphere
239.2
2785
Male, age 18, unknown
195.2
2584
Male, age 75, left hemisphere
190.1
Substantia nigra nTPM: 369.5
2699
Male, age 18, unknown
605.4
1916
Female, age 42, unknown
466.8
2241
Male, age 72, unknown
384.8
2409
Female, age 72, unknown
383.0
1851
Male, age 51, unknown
370.0
1889
Female, age 72, unknown
338.0
2590
Female, age 75, unknown
323.3
2665
Male, age 74, both hemispheres
317.0
1941
Male, age 53, unknown
260.0
2583
Male, age 75, right hemisphere
246.5
Superior colliculus nTPM: 327.6
2087
Female, age 72, unknown
387.4
1796
Male, age 53, unknown
387.0
2664
Male, age 75, both hemispheres
369.3
1839
Male, age 51, unknown
356.6
2261
Male, age 18, unknown
343.7
1995
Male, age 72, unknown
326.0
1913
Female, age 42, unknown
295.6
2587
Male, age 74, left hemisphere
295.3
2668
Female, age 75, unknown
258.9
1895
Male, age 76, right hemisphere
256.4
Ventral tegmental area nTPM: 339.7
2021
Male, age 53, unknown
394.3
1915
Female, age 42, unknown
384.1
2410
Female, age 72, unknown
353.2
1942
Male, age 51, unknown
342.7
2218
Male, age 76, both hemispheres
322.5
2223
Female, age 72, unknown
241.2
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
235.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 235.9
Samples: 183
Max nTPM: 817.9
Min nTPM: 52.5
Std nTPM: 125.6
Median nTPM: 207.9
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
817.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
716.6
GTEX-1117F-0011-R2b-SM-GI4VL
60-69 years, female
611.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
589.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
579.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
567.1
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
546.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
529.0
GTEX-1192X-0011-R2b-SM-GI4VV
50-59 years, male
515.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
511.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
478.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
471.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
466.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
460.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
439.9
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
434.3
GTEX-11TTK-0011-R2b-SM-GJ3PU
60-69 years, female
418.3
GTEX-1R9PO-0011-R2a-SM-F2TBH
60-69 years, female
407.5
GTEX-15SHU-0011-R2a-SM-GPRXS
40-49 years, female
396.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
377.4
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
369.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
364.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
348.5
GTEX-1KWVE-0011-R2a-SM-G8OLX
30-39 years, male
345.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
343.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
343.2
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
340.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
340.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
332.8
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
331.8
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
329.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
324.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
318.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
318.7
GTEX-1RQEC-0011-R2b-SM-EY5ZT
60-69 years, male
317.1
GTEX-1PWST-0011-R2b-SM-F3K5I
70-79 years, male
316.0
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
310.0
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
300.7
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
294.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
293.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
290.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
290.1
GTEX-1MCQQ-0011-R2a-SM-F649V
60-69 years, male
289.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
286.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
285.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
281.8
GTEX-1NV5F-0011-R2a-SM-G8LME
60-69 years, female
280.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
279.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
278.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
278.0
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
273.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
270.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
263.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
262.8
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
262.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
259.4
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
259.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
255.3
GTEX-1JMPZ-0011-R2a-SM-G8LLS
30-39 years, male
253.9
GTEX-1QMI2-0011-R2b-SM-F648R
60-69 years, male
253.7
GTEX-13OVL-0011-R2b-SM-H65ZN
50-59 years, male
252.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
251.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
251.0
GTEX-ZYY3-0011-R2a-SM-GNTB2
60-69 years, female
250.9
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
250.3
GTEX-13OW7-0011-R2b-SM-H6Q8E
50-59 years, male
249.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
247.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
247.0
GTEX-1JJ6O-0011-R2a-SM-EY5ZO
60-69 years, male
243.9
GTEX-1O9I2-0011-R2b-SM-F3K53
50-59 years, male
243.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
242.3
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
241.2
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
235.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
230.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
227.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
227.2
GTEX-11NUK-0011-R2a-SM-GINAO
50-59 years, male
226.8
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
223.6
GTEX-1N2EF-0011-R2b-SM-F6482
60-69 years, male
221.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
219.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
218.0
GTEX-1JN1M-0011-R2b-SM-G9EPE
60-69 years, female
217.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
216.6
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
215.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
215.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
214.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
212.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
212.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
210.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
210.0
GTEX-1LKK1-0011-R2b-SM-G8OLT
50-59 years, female
209.2
GTEX-1KD4Q-0011-R2a-SM-F649I
40-49 years, male
207.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
207.7
GTEX-1LG7Y-0011-R2b-SM-G8LMM
50-59 years, male
206.3
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
203.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
203.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
203.5
GTEX-1KD5A-0011-R2b-SM-G9EPP
50-59 years, male
203.4
GTEX-16GPK-0011-R2a-SM-GRR1F
60-69 years, male
200.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
199.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
197.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
196.5
GTEX-1RQED-0011-R2a-SM-F3K5T
60-69 years, male
195.4
GTEX-1RDX4-0011-R2b-SM-F649Z
50-59 years, female
195.3
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
195.2
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
194.6
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
194.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
193.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
190.9
GTEX-1LSVX-0011-R2a-SM-G8OL9
60-69 years, male
190.8
GTEX-1I19N-0011-R2b-SM-GPRYG
70-79 years, male
187.5
GTEX-1NV8Z-0011-R2b-SM-F648N
60-69 years, male
187.2
GTEX-1HBPH-0011-R2a-SM-GQ1DS
40-49 years, female
187.1
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
186.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
186.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
186.4
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
185.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
185.0
GTEX-1MJK2-0011-R2b-SM-EXUS5
50-59 years, male
179.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
178.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
175.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
174.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
173.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
172.5
GTEX-1PPGY-0011-R2b-SM-F33YW
60-69 years, male
172.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
168.4
GTEX-1IDJH-0011-R2a-SM-GPI9D
70-79 years, male
166.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
163.3
GTEX-111FC-0011-R2a-SM-GIN8S
60-69 years, male
162.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
162.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
161.6
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
160.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
159.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
158.3
GTEX-1N2EE-0011-R2a-SM-F649F
60-69 years, male
157.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
156.6
GTEX-ZAJG-0011-R2a-SM-GNTAX
50-59 years, female
156.6
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
154.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
153.5
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
150.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
149.0
GTEX-1P4AB-0011-R2a-SM-F649K
50-59 years, male
147.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
146.3
GTEX-12696-0011-R2b-SM-GHWPY
60-69 years, male
145.3
GTEX-1POEN-0011-R2b-SM-G8LLP
30-39 years, female
145.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
142.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
140.7
GTEX-15G19-0011-R2b-SM-H6Q7S
60-69 years, male
140.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
138.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
138.4
GTEX-117XS-0011-R2b-SM-GI4VT
60-69 years, male
134.8
GTEX-1JMQJ-0011-R2a-SM-F6493
50-59 years, male
132.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
132.0
GTEX-1R9K4-0011-R2b-SM-G8LLF
60-69 years, male
129.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
127.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
126.3
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
125.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
124.9
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
124.6
GTEX-1PIIG-0011-R2b-SM-F648W
30-39 years, male
119.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
118.5
GTEX-ZZPT-0011-R2a-SM-GNTB1
50-59 years, male
117.6
GTEX-X4EP-0011-R2B-SM-3P625
60-69 years, female
114.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
112.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
110.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
107.6
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
105.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
103.4
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
100.0
GTEX-ZAK1-0011-R2a-SM-GPRX1
50-59 years, female
99.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
93.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
90.0
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
89.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
88.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
79.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
77.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
76.0
GTEX-1N5O9-0011-R2a-SM-G8LM1
60-69 years, male
74.7
GTEX-1CB4J-0011-R2a-SM-9WG5N
60-69 years, male
71.0
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
68.3
GTEX-RN5K-0011-R2A-SM-GQ1CA
50-59 years, female
61.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
60.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
52.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
245.1
Pig sample
Sample description
nTPM
Substantia nigra nTPM: 229.0
Samples: 4
Max nTPM: 252.5
Min nTPM: 207.8
Sample A
Female
229.6
Sample B
Female
226.2
Sample C
Male
207.8
Sample D
Male
252.5
Midbrain nTPM: 245.1
Samples: 4
Max nTPM: 279.7
Min nTPM: 195.4
Sample A
Female
279.7
Sample B
Female
279.6
Sample C
Male
225.5
Sample D
Male
195.4
Periaqueductal gray nTPM: 244.3
Samples: 3
Max nTPM: 295.4
Min nTPM: 209.3
Sample B
Female
295.4
Sample C
Male
228.1
Sample D
Male
209.3
Superior colliculi nTPM: 237.1
Samples: 4
Max nTPM: 262.5
Min nTPM: 224.7
Sample A
Female
262.5
Sample B
Female
231.3
Sample C
Male
230.0
Sample D
Male
224.7
MIDBRAIN - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
269.6
Mouse sample
Sample description
nTPM
Midbrain nTPM: 269.6
Samples: 4
Max nTPM: 281.8
Min nTPM: 261.4
Sample A
Male
263.5
Sample B
Male
261.4
Sample C
Female
281.8
Sample D
Female
271.8
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.