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  • RNF181
TISSUE PRIMARY DATA AMYGDALA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Amygdala
Tissue methods
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:95.9 nTPM
HPA Brain:45.1 nTPM
GTEx:95.9 nTPM
FANTOM5:43.9 Scaled Tags Per Million
Pig:26.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.1
Sample id Sample description nTPM
Amygdala
nTPM: 45.1
2695 Female, age 67, right hemisphere 51.0
2814 Male, age 76, right hemisphere 50.7
2514 Male, age 75, right hemisphere 46.9
1987 Female, age 91, left hemisphere 42.8
2517 Female, age 94, left hemisphere 34.1
Basal amygdala
nTPM: 40.5
2609 Male, age 75, right hemisphere 44.3
1955 Male, age 76, both hemispheres 42.6
2110 Male, age 80, left hemisphere 42.3
2243 Female, age 91, right hemisphere 40.3
2685 Female, age 94, left hemisphere 40.3
2827 Female, age 67, right hemisphere 33.1
Central amygdala
nTPM: 42.6
1905 Male, age 76, both hemispheres 45.8
2515 Male, age 75, right hemisphere 43.3
2826 Female, age 94, left hemisphere 43.0
2239 Male, age 80, left hemisphere 41.6
2701 Female, age 91, right hemisphere 39.5
Corticomedial amygdala
nTPM: 41.8
2428 Male, age 75, right hemisphere 50.7
2829 Male, age 80, left hemisphere 45.2
2429 Female, age 94, left hemisphere 41.8
2240 Male, age 76, both hemispheres 40.4
2242 Female, age 91, right hemisphere 38.6
2535 Female, age 67, right hemisphere 33.9
Lateral amygdala
nTPM: 40.3
2516 Male, age 75, right hemisphere 47.5
1883 Male, age 76, both hemispheres 45.1
2256 Male, age 80, left hemisphere 38.5
2534 Female, age 94, left hemisphere 38.5
2830 Female, age 67, right hemisphere 36.8
2255 Female, age 91, right hemisphere 35.4

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 95.9
Samples: 181

Max nTPM: 222.3
Min nTPM: 53.7
Std nTPM: 26.8
Median nTPM: 92.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 222.3
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 214.0
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 205.7
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 195.4
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 194.2
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 172.5
GTEX-1PWST-0011-R4a-SM-F2T9X 70-79 years, male 169.4
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 153.9
GTEX-11DYG-0011-R4b-SM-GJ3RG 60-69 years, male 145.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 139.1
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 133.4
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 131.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 131.5
GTEX-11NV4-0011-R4a-SM-GI4XC 60-69 years, male 127.4
GTEX-111FC-0011-R4a-SM-GIN8K 60-69 years, male 124.0
GTEX-1RLM8-0011-R4a-SM-F2TBL 50-59 years, male 123.8
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 123.3
GTEX-1JMQK-0011-R4a-SM-G8LLQ 60-69 years, male 121.8
GTEX-1JJ6O-0011-R4a-SM-EY5YM 60-69 years, male 120.5
GTEX-11OF3-0011-R4a-SM-GJ3RB 60-69 years, male 117.7
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 116.9
GTEX-1P4AB-0011-R4b-SM-F2T9S 50-59 years, male 116.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 114.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 113.6
GTEX-14C5O-0011-R4b-SM-G9ERF 60-69 years, male 112.7
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 111.7
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 111.5
GTEX-11DXY-0011-R4b-SM-GI4VR 60-69 years, male 111.4
GTEX-1LKK1-0011-R4b-SM-EY5YA 50-59 years, female 111.1
GTEX-1O9I2-0011-R4b-SM-F3K4K 50-59 years, male 111.0
GTEX-PVOW-0011-R4A-SM-H6Q8O 40-49 years, male 110.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 110.3
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 110.0
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 109.0
GTEX-12WSC-0011-R4a-SM-H6Q8M 50-59 years, male 108.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 108.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 108.4
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 107.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 107.7
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 107.2
GTEX-15RJE-0011-R4a-SM-H7OH4 40-49 years, male 106.7
GTEX-1LB8K-0011-R4b-SM-F6487 50-59 years, male 106.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 106.1
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 105.9
GTEX-13FHO-0011-R4b-SM-H6611 60-69 years, male 105.9
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 105.9
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 105.7
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 105.4
GTEX-1LVA9-0011-R4a-SM-F2TA2 50-59 years, male 105.2
GTEX-1RDX4-0011-R4b-SM-F3K43 50-59 years, female 105.2
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 105.1
GTEX-1JN1M-0011-R4b-SM-F6494 60-69 years, female 103.1
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 102.9
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 102.7
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 102.4
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 101.7
GTEX-1LH75-0011-R4a-SM-F2TAM 50-59 years, female 101.5
GTEX-12ZZY-0011-R4a-SM-GIN9F 60-69 years, male 100.9
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 100.9
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 100.5
GTEX-1MJK2-0011-R4a-SM-F3426 50-59 years, male 100.2
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 99.5
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 99.5
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 99.2
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 98.7
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 98.5
GTEX-1JMLX-0011-R4a-SM-EY5YJ 50-59 years, male 97.9
GTEX-147F4-0011-R4b-SM-GJ3R4 50-59 years, male 97.6
GTEX-11GSO-0011-R4b-SM-GJ3R8 60-69 years, male 97.3
GTEX-1KWVE-0011-R4a-SM-F3K5X 30-39 years, male 96.1
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 95.7
GTEX-1R46S-0011-R4b-SM-F2TBF 60-69 years, female 95.7
GTEX-1JMOU-0011-R4b-SM-EY5ZL 60-69 years, female 95.1
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 95.1
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 94.9
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 94.8
GTEX-ZYY3-0011-R4a-SM-GQ1CY 60-69 years, female 94.5
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 94.4
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 94.4
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 94.3
GTEX-11ZTS-0011-R4b-SM-GINAQ 60-69 years, female 94.0
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 94.0
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 93.6
GTEX-1NV8Z-0011-R4b-SM-G8LMZ 60-69 years, male 93.6
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 93.0
GTEX-117XS-0011-R4b-SM-GJ3PR 60-69 years, male 92.7
GTEX-1OJC4-0011-R4a-SM-F3K54 50-59 years, female 92.3
GTEX-1117F-0011-R4b-SM-GI4VM 60-69 years, female 92.2
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 92.2
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 92.0
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 92.0
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 91.3
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 90.9
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 90.7
GTEX-13PLJ-0011-R4b-SM-GJ3R6 60-69 years, female 90.4
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 90.4
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 89.9
GTEX-1PIIG-0011-R4a-SM-F2TAQ 30-39 years, male 89.7
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 89.2
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 89.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 89.1
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 88.5
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 88.4
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 88.4
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 88.2
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 88.0
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 87.3
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 87.2
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 87.0
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 86.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 86.0
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 85.7
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 85.7
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 85.6
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 84.5
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 84.4
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 84.3
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 83.8
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 83.5
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 83.4
GTEX-1QMI2-0011-R4b-SM-F3K4R 60-69 years, male 83.2
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 82.9
GTEX-ZZPT-0011-R4a-SM-GPRX4 50-59 years, male 82.9
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 82.8
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 82.5
GTEX-1PPGY-0011-R4a-SM-F3K4F 60-69 years, male 82.5
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 82.5
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 82.3
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 82.1
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 81.7
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 81.5
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 80.8
GTEX-1RQEC-0011-R4b-SM-F342C 60-69 years, male 80.7
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 79.8
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 79.4
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 79.3
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 79.1
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 79.1
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 78.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 78.5
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 77.9
GTEX-1QP6S-0011-R4b-SM-F33ZY 40-49 years, male 77.7
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 77.5
GTEX-11GS4-0011-R4a-SM-GJ3RJ 60-69 years, male 77.1
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 77.1
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 76.7
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 76.4
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 76.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 75.6
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 75.5
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 75.1
GTEX-1POEN-0011-R4b-SM-F3K4O 30-39 years, female 74.1
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 74.0
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 72.9
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 72.9
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 72.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 72.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 72.1
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 71.9
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 71.8
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 71.7
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 71.1
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 71.0
GTEX-1RQED-0011-R4b-SM-F2I2X 60-69 years, male 69.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 69.3
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 68.8
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 68.8
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 68.5
GTEX-1N2EF-0011-R4a-SM-F341F 60-69 years, male 68.2
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 67.2
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 67.0
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 66.8
GTEX-13QJC-0011-R4a-SM-H65ZP 60-69 years, female 65.7
GTEX-145LU-0011-R4b-SM-5P9K1 50-59 years, male 65.7
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 64.9
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 64.7
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 64.6
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 63.0
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 58.5
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 58.3
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 53.7
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

43.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 43.9
FF:10151-102I7 76 years, female 43.9

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.5
Pig sample Sample description nTPM
Amygdala
nTPM: 26.5
Samples: 4

Max nTPM: 28.5
Min nTPM: 24.2
Sample A Female 28.5
Sample B Female 27.2
Sample C Male 26.0
Sample D Male 24.2

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