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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:81.7 nTPM
HPA:81.7 nTPM
GTEx:79.4 nTPM
FANTOM5:112.8 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA046112Antibody HPA062121
Glandular cells MediumMedium




SALIVARY GLAND - TISSUE (MS)i

The MS-based protein data details section shows detailed information about the individual samples used for the relative protein abundance measurements.

Intensity values provides a relative protein abundance comparable between different genes and samples. All samples comes from one female donor. Median detection value represents the tissue for specificity and distribution categories. Protein detection is defined as a non-missing intensity value, and protein values are set to missing for a tissue if more than half of its replicates lacked a measurement for that protein.

Read more
Median intensity 1252329
Replicate Intensity
Salivary gland_01
967652
Salivary gland_02
1252329
Salivary gland_03
1338851

SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.7
overview
Female, age 68
Salivary gland sample 216
nTPM: 91.6
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 77.6
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 76
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.4
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 79.4
Samples: 181

Max nTPM: 152.7
Min nTPM: 48.1
Std nTPM: 15.9
Median nTPM: 78.0
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 152.7
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 150.2
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 130.6
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 118.3
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 114.9
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 108.9
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 108.7
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 107.2
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 106.9
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 105.7
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 104.4
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 104.1
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 100.9
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 99.0
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 98.8
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 97.7
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 97.5
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 97.5
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 97.3
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 97.2
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 96.9
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 96.3
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 95.8
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 95.2
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 94.5
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 94.0
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 94.0
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 93.9
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 93.2
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 93.2
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 93.0
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 92.5
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 92.5
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 91.9
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 91.7
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 91.0
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 90.8
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 90.5
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 90.4
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 90.4
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 90.3
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 90.1
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 89.9
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 89.8
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 89.6
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 89.3
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 89.0
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 88.4
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 88.3
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 88.1
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 87.4
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 86.7
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 86.2
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 85.9
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 85.9
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 85.7
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 85.5
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 84.1
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 83.9
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 83.5
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 83.2
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 83.1
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 83.0
GTEX-11P82-0926-SM-5986X 20-29 years, male 82.9
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 82.7
GTEX-Y111-2626-SM-4TT24 50-59 years, male 82.7
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 82.6
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 82.0
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 81.9
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 81.3
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 80.8
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 80.7
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 80.6
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 80.2
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 80.2
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 79.9
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 79.7
GTEX-15SHV-2226-SM-6M464 60-69 years, male 79.7
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 79.7
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 79.3
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 79.3
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 79.2
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 79.1
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 79.0
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 78.8
GTEX-X261-2426-SM-4PQZU 50-59 years, male 78.4
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 78.3
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 78.3
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 78.2
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 78.1
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 78.0
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 77.7
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 77.6
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 76.9
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 76.4
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 76.3
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 76.0
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 76.0
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 75.7
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 75.5
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 75.2
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 74.8
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 74.5
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 74.5
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 74.4
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 73.7
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 73.7
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 73.5
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 73.4
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 73.2
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 73.2
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 73.2
GTEX-1445S-2926-SM-5O993 60-69 years, male 73.0
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 73.0
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 72.9
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 72.9
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 72.8
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 72.4
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 72.1
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 72.0
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 71.7
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 71.6
GTEX-178AV-1426-SM-6LLID 40-49 years, male 71.3
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 71.2
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 71.2
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 71.0
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 70.9
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 70.6
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 70.5
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 70.4
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 70.4
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 70.4
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 70.3
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 70.3
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 69.9
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 69.5
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 69.5
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 69.4
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 69.3
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 69.2
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 68.5
GTEX-1B932-0626-SM-731EM 40-49 years, female 68.5
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 68.3
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 68.3
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 67.6
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 67.1
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 66.9
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 66.5
GTEX-146FR-1226-SM-5MR78 60-69 years, female 66.2
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 66.1
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 65.9
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 65.8
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 65.4
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 65.1
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 64.6
GTEX-13113-1526-SM-5EGHV 60-69 years, female 64.4
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 63.9
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 63.0
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 62.8
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 62.4
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 62.3
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 61.8
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 61.1
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 61.0
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 60.9
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 59.7
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 59.5
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 59.2
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 59.1
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 58.8
GTEX-13O21-1926-SM-5MR39 50-59 years, male 58.1
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 57.8
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 56.8
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 56.5
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 55.6
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 55.3
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 52.3
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 52.0
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 51.1
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 50.0
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 48.1
Show allShow less

SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

112.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 112.8
FF:10199-103F1 23 years, male 112.8
Salivary gland
Scaled Tags Per Million: 90.6
FF:10093-102C3 16-60 years, mixed 90.6
Submaxillary gland
Scaled Tags Per Million: 81.6
FF:10202-103F4 24 years, male 81.6

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