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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • CPLX1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN40 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM8 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE13 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL SPINAL CORD ENTORHINAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:290.9 nTPM
GTEx:199.8 nTPM
FANTOM5:174.2 Scaled Tags Per Million
Pig:163.7 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

290.9
Sample id Sample description nTPM
Putamen
nTPM: 290.9
2647 Male, age 75, left hemisphere 420.5
1829 Male, age 74, unknown 363.7
1838 Male, age 80, right hemisphere 308.2
2489 Female, age 72, unknown 295.1
1937 Female, age 91, right hemisphere 241.4
2466 Female, age 79, unknown 210.4
2482 Female, age 94, left hemisphere 197.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

199.8
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 199.8
Samples: 254

Max nTPM: 438.2
Min nTPM: 18.5
Std nTPM: 89.0
Median nTPM: 210.8
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 438.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 411.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 405.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 381.5
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 377.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 369.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 368.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 367.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 364.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 360.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 358.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 355.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 351.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 344.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 343.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 341.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 332.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 321.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 317.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 317.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 316.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 311.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 310.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 309.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 307.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 307.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 305.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 304.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 302.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 301.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 299.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 298.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 297.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 295.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 293.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 292.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 292.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 292.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 291.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 291.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 290.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 289.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 289.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 289.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 283.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 281.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 278.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 277.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 277.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 277.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 272.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 272.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 272.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 271.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 268.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 267.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 266.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 264.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 264.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 263.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 259.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 259.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 258.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 258.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 257.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 256.7
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 256.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 254.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 254.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 253.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 253.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 252.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 252.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 251.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 251.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 251.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 250.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 250.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 250.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 249.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 249.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 248.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 248.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 247.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 246.9
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 246.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 246.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 243.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 241.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 241.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 239.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 238.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 237.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 237.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 236.2
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 235.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 235.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 233.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 233.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 232.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 231.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 230.4
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 228.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 228.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 228.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 228.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 226.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 225.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 224.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 223.9
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 223.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 223.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 222.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 220.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 220.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 219.8
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 218.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 218.2
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 215.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 214.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 214.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 214.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 214.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 213.7
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 213.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 211.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 210.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 210.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 210.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 205.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 205.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 204.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 200.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 200.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 199.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 198.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 198.6
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 198.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 197.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 197.4
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 197.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 197.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 196.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 194.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 190.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 190.7
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 188.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 187.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 186.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 186.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 186.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 183.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 182.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 181.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 180.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 180.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 178.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 177.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 176.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 174.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 172.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 172.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 171.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 171.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 167.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 165.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 164.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 162.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 162.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 162.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 162.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 161.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 160.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 159.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 156.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 155.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 153.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 151.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 151.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 151.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 146.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 144.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 140.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 140.5
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 138.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 136.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 134.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 132.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 131.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 130.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 127.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 126.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 126.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 126.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 122.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 122.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 121.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 121.2
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 116.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 116.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 112.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 110.4
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 110.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 109.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 106.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 105.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 103.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 102.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 100.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 99.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 99.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 98.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 98.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 97.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 94.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 92.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 92.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 92.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 90.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 87.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 85.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 81.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 80.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 79.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 79.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 79.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 76.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 75.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 72.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 72.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 70.9
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 67.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 64.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 64.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 64.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 61.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 60.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 57.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 56.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 54.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 52.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 51.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 50.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 40.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 39.7
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 39.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 39.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 37.6
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 35.3
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 33.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 31.0
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 21.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 20.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 18.5
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

174.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 174.2
FF:10176-103C5 60 years, female 174.2

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

163.7
Pig sample Sample description nTPM
Putamen
nTPM: 163.7
Samples: 3

Max nTPM: 220.3
Min nTPM: 120.1
Sample B Female 120.1
Sample C Male 220.3
Sample D Male 150.8

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