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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:94.6 nTPM
HPA Brain:89.9 nTPM
GTEx:94.6 nTPM
Pig:39.5 nTPM
Mouse:12.5 nTPM
Allen mouse:0.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 62.4
1961 Female, age 42, unknown 66.0
2226 Male, age 75, left hemisphere 58.7
Dorsomedial nucleus
nTPM: 67.6
1989 Male, age 62, unknown 95.1
2041 Female, age 72, unknown 56.7
2017 Female, age 42, unknown 51.1
Lateral hypothalamic area
nTPM: 58.4
1791 Male, age 80, right hemisphere 77.1
2271 Male, age 75, both hemispheres 57.3
2412 Male, age 62, unknown 54.7
2228 Male, age 66, unknown 44.6
Mammillary body
nTPM: 89.9
2413 Male, age 66, unknown 133.7
1923 Female, age 72, unknown 97.2
1945 Male, age 80, right hemisphere 82.2
1948 Female, age 72, unknown 70.5
1834 Female, age 42, unknown 65.8
Paraventricular nucleus
nTPM: 49.7
2700 Male, age 62, unknown 49.7
Preoptic area
nTPM: 59.1
1907 Male, age 80, right hemisphere 61.4
1861 Female, age 42, unknown 60.8
2414 Female, age 72, unknown 55.1
Supraoptic nucleus
nTPM: 59.2
2043 Male, age 62, unknown 64.3
1894 Female, age 72, unknown 57.4
2835 Female, age 72, unknown 56.0
Ventromedial nucleus
nTPM: 62.1
1982 Female, age 72, unknown 74.0
1822 Female, age 42, unknown 50.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

94.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 94.6
Samples: 257

Max nTPM: 236.4
Min nTPM: 30.7
Std nTPM: 35.1
Median nTPM: 86.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 236.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 227.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 212.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 208.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 201.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 189.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 184.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 170.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 169.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 169.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 168.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 168.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 159.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 159.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 159.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 157.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 156.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 152.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 152.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 151.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 151.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 150.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 149.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 149.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 145.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 144.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 143.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 141.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 140.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 140.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 139.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 137.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 134.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 134.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 133.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 132.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 131.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 131.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 130.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 130.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 126.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 126.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 123.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 123.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 122.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 121.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 121.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 119.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 119.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 119.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 119.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 118.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 118.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 117.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 117.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 117.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 116.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 116.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 115.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 115.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 114.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 114.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 113.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 113.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 112.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 112.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 112.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 112.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 111.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 111.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 111.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 110.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 108.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 107.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 107.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 105.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 104.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 103.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 102.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 102.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 102.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 101.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 101.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 101.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 100.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 100.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 100.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 99.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 98.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 98.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 98.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 97.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 97.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 97.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 97.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 97.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 97.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 96.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 96.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 95.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 94.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 93.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 93.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 93.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 93.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 93.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 92.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 92.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 92.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 92.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 92.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 91.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 91.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 90.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 90.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 89.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 89.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 89.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 88.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 87.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 87.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 87.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 87.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 87.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 87.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 86.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 86.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 86.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 86.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 86.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 85.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 85.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 85.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 85.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 85.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 85.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 85.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 85.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 84.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 84.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 83.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 83.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 83.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 82.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 82.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 82.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 82.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 82.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 82.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 82.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 81.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 81.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 80.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 80.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 80.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 79.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 79.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 79.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 79.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 79.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 79.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 79.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 79.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 78.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 78.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 78.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 76.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 76.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 76.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 76.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 76.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 75.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 75.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 74.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 74.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 74.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 74.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 74.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 74.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 74.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 73.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 73.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 73.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 73.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 73.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 72.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 72.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 72.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 71.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 71.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 71.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 71.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 70.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 70.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 70.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 69.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 69.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 69.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 69.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 68.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 68.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 67.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 67.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 67.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 67.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 66.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 66.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 66.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 66.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 66.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 66.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 65.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 65.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 64.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 64.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 63.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 63.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 62.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 62.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 62.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 62.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 62.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 62.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 61.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 61.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 61.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 60.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 60.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 59.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 59.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 59.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 59.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 57.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 57.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 56.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 55.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 55.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 55.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 54.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 54.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 54.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 53.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 52.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 50.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 49.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 49.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 48.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 47.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 46.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 46.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 45.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 43.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 42.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 41.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 41.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 40.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 30.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 39.5
Samples: 4

Max nTPM: 50.8
Min nTPM: 28.8
Sample A Female 50.8
Sample B Female 42.7
Sample C Male 35.7
Sample D Male 28.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

12.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 12.5
Samples: 4

Max nTPM: 14.5
Min nTPM: 11.5
Sample A Male 14.5
Sample B Male 11.7
Sample C Female 12.4
Sample D Female 11.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.5
68301993 Antisense, RP_041130_02_B12, Mouse strain C57BL/6J (56 days, male) 0.5

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