HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:95.1 nTPM
HPA Brain:78.7 nTPM
GTEx:95.1 nTPM
FANTOM5:72.8 Scaled Tags Per Million
Pig:392.3 nTPM
Mouse:6.2 nTPM
Allen mouse:10.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054408
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 78.7
Sample id Sample description nTPM
Hippocampus
nTPM: 67.8
1898 Male, age 80, left hemisphere 79.4
2621 Female, age 67, right hemisphere 76.5
1855 Male, age 76, left hemisphere 73.6
2529 Female, age 94, left hemisphere 66.0
2148 Female, age 91, left hemisphere 56.9
1911 Female, age 85, right hemisphere 54.2
Dentate gyrus
nTPM: 67.0
2010 Male, age 76, both hemispheres 98.0
2530 Female, age 94, left hemisphere 70.5
1927 Female, age 91, both hemispheres 62.7
2528 Male, age 74, both hemispheres 60.7
2246 Female, age 85, both hemispheres 58.3
2531 Female, age 67, both hemispheres 51.7
Entorhinal gyrus
nTPM: 57.4
2764 Male, age 80, right hemisphere 65.4
2117 Female, age 91, right hemisphere 63.8
1787 Male, age 76, left hemisphere 62.3
1938 Female, age 85, left hemisphere 59.7
2686 Male, age 75, right hemisphere 50.2
2613 Female, age 94, left hemisphere 43.3
Hippocampus, CA1
nTPM: 78.7
2749 Male, age 80, left hemisphere 133.8
1873 Female, age 85, both hemispheres 74.4
2527 Male, age 74, both hemispheres 65.4
2045 Male, age 76, both hemispheres 63.9
2082 Female, age 91, right hemisphere 55.8
Hippocampus, CA2
nTPM: 68.0
1963 Male, age 80, left hemisphere 91.4
2249 Male, age 74, both hemispheres 76.9
1892 Male, age 76, both hemispheres 72.2
2113 Female, age 91, right hemisphere 58.1
1940 Female, age 85, left hemisphere 54.8
2437 Female, age 94, left hemisphere 54.3
Hippocampus, CA3
nTPM: 62.4
2436 Male, age 74, both hemispheres 78.0
2137 Male, age 80, left hemisphere 69.9
1867 Male, age 76, both hemispheres 68.6
1891 Female, age 85, both hemispheres 53.4
2861 Female, age 67, both hemispheres 52.8
2620 Female, age 94, left hemisphere 51.5
Parahippocampal cortex
nTPM: 54.5
2532 Female, age 72, left hemisphere 61.5
2245 Female, age 91, both hemispheres 60.5
1990 Female, age 91, right hemisphere 59.1
1850 Male, age 80, both hemispheres 57.9
2018 Male, age 76, both hemispheres 57.2
1933 Female, age 85, both hemispheres 57.1
2250 Female, age 67, right hemisphere 55.7
2692 Male, age 74, both hemispheres 49.7
2693 Female, age 94, both hemispheres 43.4
2622 Female, age 67, right hemisphere 43.0
Perirhinal gyrus
nTPM: 57.8
1794 Male, age 80, right hemisphere 64.8
1847 Female, age 91, left hemisphere 64.4
1841 Female, age 85, right hemisphere 57.2
2848 Male, age 76, right hemisphere 51.4
2521 Female, age 94, right hemisphere 51.2
Subiculum
nTPM: 60.3
2042 Male, age 76, both hemispheres 63.5
1977 Female, age 85, both hemispheres 62.6
2438 Female, age 94, left hemisphere 61.3
2619 Male, age 74, both hemispheres 60.6
1901 Male, age 80, both hemispheres 59.9
2729 Female, age 91, right hemisphere 53.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 95.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 95.1
Samples: 255

Max nTPM: 192.5
Min nTPM: 52.3
Std nTPM: 22.1
Median nTPM: 90.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 192.5
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 171.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 170.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 161.9
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 160.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 152.9
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 152.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 145.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 142.7
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 142.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 140.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 72.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.8
FF:10169-103B7 60 years, female 86.2
FF:10153-102I9 76 years, female 59.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 392.3
Pig sample Sample description nTPM
Subiculum
nTPM: 317.6
Samples: 4

Max nTPM: 422.5
Min nTPM: 272.3
Sample A Female 422.5
Sample B Female 298.7
Sample C Male 272.3
Sample D Male 276.9
Dorsal hippocampus
nTPM: 392.3
Samples: 4

Max nTPM: 567.8
Min nTPM: 270.8
Sample A Female 567.8
Sample B Female 368.3
Sample C Male 362.2
Sample D Male 270.8
Entorhinal cortex
nTPM: 279.1
Samples: 4

Max nTPM: 328.8
Min nTPM: 216.2
Sample A Female 294.9
Sample B Female 328.8
Sample C Male 276.4
Sample D Male 216.2
Ventral hippocampus
nTPM: 346.2
Samples: 4

Max nTPM: 382.7
Min nTPM: 278.1
Sample A Female 370.7
Sample B Female 278.1
Sample C Male 382.7
Sample D Male 353.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 6.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.2
Samples: 4

Max nTPM: 7.4
Min nTPM: 5.3
Sample A Male 5.8
Sample B Male 7.4
Sample C Female 6.1
Sample D Female 5.3
Hippocampal formation
nTPM: 6.1
Samples: 4

Max nTPM: 6.8
Min nTPM: 5.6
Sample A Male 5.6
Sample B Male 6.4
Sample C Female 5.6
Sample D Female 6.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.8
69059832 Antisense, RP_050317_04_B07, Mouse strain C57BL/6J (56 days, male) 10.8

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