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  • SF3B5
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:95.9 nTPM
HPA Brain:76.8 nTPM
GTEx:95.9 nTPM
Pig:353.0 nTPM
Mouse:3.2 nTPM
Allen mouse:3.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 71.3
2226 Male, age 75, left hemisphere 76.9
1961 Female, age 42, unknown 65.6
Dorsomedial nucleus
nTPM: 62.5
2041 Female, age 72, unknown 66.7
1989 Male, age 62, unknown 66.1
2017 Female, age 42, unknown 54.8
Lateral hypothalamic area
nTPM: 76.8
1791 Male, age 80, right hemisphere 89.8
2271 Male, age 75, both hemispheres 86.6
2228 Male, age 66, unknown 68.5
2412 Male, age 62, unknown 62.3
Mammillary body
nTPM: 73.5
1923 Female, age 72, unknown 91.3
2413 Male, age 66, unknown 77.7
1948 Female, age 72, unknown 69.3
1834 Female, age 42, unknown 65.7
1945 Male, age 80, right hemisphere 63.3
Paraventricular nucleus
nTPM: 62.5
2700 Male, age 62, unknown 62.5
Preoptic area
nTPM: 63.3
1907 Male, age 80, right hemisphere 65.2
2414 Female, age 72, unknown 63.3
1861 Female, age 42, unknown 61.4
Supraoptic nucleus
nTPM: 75.3
2835 Female, age 72, unknown 78.5
2043 Male, age 62, unknown 75.8
1894 Female, age 72, unknown 71.6
Ventromedial nucleus
nTPM: 60.9
1982 Female, age 72, unknown 64.9
1822 Female, age 42, unknown 56.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 95.9
Samples: 257

Max nTPM: 217.2
Min nTPM: 49.3
Std nTPM: 20.5
Median nTPM: 94.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 217.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 185.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 180.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 171.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 160.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 147.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 146.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 142.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 140.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 139.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 136.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 135.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 133.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 131.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 127.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 126.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 126.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 124.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 122.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 122.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 120.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 119.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 118.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 118.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 118.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 117.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 117.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 115.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 115.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 115.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 114.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 114.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 114.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 113.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 113.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 112.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 112.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 112.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 111.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 110.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 110.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 109.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 108.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 108.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 107.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 107.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 107.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 107.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 107.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 107.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 106.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 106.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 106.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 106.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 105.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 105.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 104.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 104.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 104.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 104.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 104.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 103.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 103.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 103.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 103.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 103.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 103.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 102.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 102.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 102.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 102.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 102.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 102.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 102.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 102.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 102.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 102.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 102.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 101.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 101.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 101.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 101.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 100.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 100.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 100.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 100.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 100.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 100.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 100.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 100.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 100.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 100.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 99.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 99.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 99.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 98.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 98.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 98.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 97.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 97.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 97.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 97.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 97.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 96.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 96.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 96.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 96.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 96.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 95.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 95.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 95.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 95.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 95.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 95.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 95.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 95.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 95.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 95.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 95.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 95.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 94.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 94.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 94.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 94.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 94.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 94.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 94.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 94.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 94.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 94.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 93.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 93.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 93.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 93.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 93.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 93.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 92.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 92.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 92.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 91.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 91.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 91.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 91.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 91.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 91.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 90.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 90.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 90.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 90.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 90.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 90.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 90.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 90.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 90.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 90.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 89.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 89.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 89.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 88.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 88.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 88.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 88.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 88.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 88.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 88.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 88.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 87.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 87.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 87.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 87.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 87.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 86.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 86.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 86.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 86.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 86.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 86.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 85.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 85.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 85.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 85.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 85.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 84.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 84.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 84.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 84.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 84.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 83.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 83.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 83.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 83.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 82.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 82.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 82.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 82.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 82.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 82.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 82.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 82.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 81.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 81.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 81.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 81.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 80.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 80.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 80.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 80.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 80.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 79.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 79.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 79.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 79.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 79.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 79.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 79.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 79.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 78.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 78.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 78.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 78.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 78.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 78.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 78.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 77.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 77.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 76.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 76.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 76.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 76.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 75.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 75.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 75.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 75.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 74.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 73.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 73.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 73.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 73.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 73.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 72.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 72.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 72.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 72.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 72.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 69.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 69.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 69.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 69.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 69.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 66.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 64.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 63.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 62.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 61.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 56.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 52.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 49.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

353.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 353.0
Samples: 4

Max nTPM: 509.3
Min nTPM: 249.4
Sample A Female 509.3
Sample B Female 337.4
Sample C Male 315.9
Sample D Male 249.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 3.3
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.2
Sample A Male 4.1
Sample B Male 4.2
Sample C Female 2.2
Sample D Female 2.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.0
69059832 Antisense, RP_050317_04_B07, Mouse strain C57BL/6J (56 days, male) 3.0

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