HNRNPA3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • HNRNPA3
EVOLUTIONARY URINARY BLADDER Show tissue menu
BRAIN66 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM10 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS
MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Kidney & Urinary bladder
Evolutionary methods
URINARY BLADDER - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:152.9 nTPM
HPA:144.2 nTPM
GTEx:152.9 nTPM
FANTOM5:1.1 Scaled Tags Per Million
Macaque:147.8 nTPM
Mouse:86.9 nTPM
Rat:157.5 nTPM
URINARY BLADDER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

URINARY BLADDER - Annotated protein expression
Pending normal tissue analysis

URINARY BLADDER - PROTEINTALKS DB MS
Median intensity 61587
Sample Intensity
Urinary bladder_01
61587

URINARY BLADDER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

144.2
overview
Male, age 74
Urinary bladder sample 264
nTPM: 73.9
Cell types%
Urothelial cells:
5

Smooth muscle cells:
60

Fibroblasts:
20

Endothelial cells:
10

Other cell types:
5

overview
Male, age 80
Urinary bladder sample 265
nTPM: 111.7
Cell types%
Urothelial cells:
10

Smooth muscle cells:
45

Fibroblasts:
15

Endothelial cells:
10

Other cell types:
20

N/A
Female, age 79
Urinary bladder sample 1597
nTPM: 213
N/A
Male, age 52
Urinary bladder sample 1598
nTPM: 178.3

URINARY BLADDER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

152.9
GTEx sample id Sample description nTPM
Bladder
Average nTPM: 152.9
Samples: 77

Max nTPM: 238.8
Min nTPM: 97.0
Std nTPM: 27.6
Median nTPM: 152.3
GTEX-NPJ8-1126-SM-GNTAI 40-49 years, male 238.8
GTEX-OHPL-1926-SM-HAV18 60-69 years, female 223.6
GTEX-RUSQ-1326-SM-GQ1EA 50-59 years, male 211.7
GTEX-T5JW-1026-SM-EZ6LR 20-29 years, female 203.2
GTEX-OIZF-1926-SM-7PBZS 60-69 years, male 198.5
GTEX-P4QS-1926-SM-GQ1BY 60-69 years, male 194.5
GTEX-QDVJ-1526-SM-GPI84 50-59 years, male 189.1
GTEX-R53T-1426-SM-H7OG3 50-59 years, female 187.5
GTEX-Q2AH-1326-SM-GPRWF 40-49 years, male 183.6
GTEX-QEG5-2326-SM-GRR2Z 20-29 years, male 182.0
GTEX-QDVN-1426-SM-GPRWL 50-59 years, male 181.5
GTEX-OOBK-1926-SM-HAUZL 40-49 years, male 177.3
GTEX-O5YT-1926-SM-H6Q82 20-29 years, male 176.0
GTEX-OHPK-1926-SM-H7OF2 50-59 years, female 175.8
GTEX-QXCU-2226-SM-GPI87 50-59 years, male 173.0
GTEX-RWSA-2126-SM-H7OG7 40-49 years, male 171.9
GTEX-QEL4-1826-SM-EZ6KU 50-59 years, male 170.8
GTEX-PWCY-1126-SM-H7OGX 20-29 years, female 169.4
GTEX-RM2N-1026-SM-GOQY8 50-59 years, male 168.8
GTEX-T6MN-2226-SM-EVYAM 50-59 years, male 167.3
GTEX-OXRK-1926-SM-GRR1N 50-59 years, female 167.2
GTEX-T2IS-2526-SM-GRR23 20-29 years, female 167.1
GTEX-T6MO-0926-SM-GPRWN 40-49 years, female 166.0
GTEX-S7SF-1126-SM-GQ1CH 20-29 years, female 165.4
GTEX-P78B-2126-SM-GQ1C3 40-49 years, female 164.7
GTEX-P4QT-1926-SM-HAUYQ 50-59 years, female 164.5
GTEX-T8EM-1726-SM-GPRWO 40-49 years, male 164.0
GTEX-Q2AI-1026-SM-GRR3I 40-49 years, male 162.7
GTEX-QCQG-0826-SM-GPI8H 50-59 years, female 162.3
GTEX-OHPM-1926-SM-H7OG1 50-59 years, male 160.8
GTEX-POMQ-0926-SM-H6Q6H 20-29 years, female 160.8
GTEX-QDT8-2826-SM-GOQYY 30-39 years, female 160.3
GTEX-QLQ7-1226-SM-GOQYE 60-69 years, male 159.7
GTEX-R55C-1226-SM-GOQY7 40-49 years, male 158.2
GTEX-S33H-1926-SM-EYYVH 30-39 years, male 157.7
GTEX-PX3G-1926-SM-GQ1ED 20-29 years, female 155.7
GTEX-R55G-1326-SM-HAUYU 40-49 years, female 154.3
GTEX-QV44-1426-SM-GPI8D 50-59 years, male 154.2
GTEX-OIZH-1926-SM-GPRXO 50-59 years, male 152.3
GTEX-PWN1-1926-SM-HAUZN 40-49 years, female 149.7
GTEX-PW2O-1026-SM-GPRWA 20-29 years, male 149.4
GTEX-P4PQ-1926-SM-GRR14 60-69 years, male 149.3
GTEX-PLZ5-1326-SM-GQ1C2 50-59 years, male 148.4
GTEX-QMRM-1326-SM-HAUYS 50-59 years, male 146.1
GTEX-RN64-2426-SM-EZ6L2 50-59 years, male 145.4
GTEX-P4PP-1926-SM-HAUZM 30-39 years, female 144.9
GTEX-PLZ6-1026-SM-GQ1C8 30-39 years, male 144.9
GTEX-SUCS-1226-SM-GPI9A 70-79 years, male 143.7
GTEX-QLQW-0826-SM-H7OG2 30-39 years, male 143.4
GTEX-S32W-1126-SM-4AD5V 50-59 years, female 142.9
GTEX-U3ZH-0826-SM-H6Q7I 30-39 years, male 142.5
GTEX-P44H-2226-SM-E9U4P 40-49 years, male 142.3
GTEX-N7MT-1826-SM-GQ1C9 60-69 years, female 139.6
GTEX-S95S-0626-SM-EZ6L8 60-69 years, male 139.6
GTEX-QV31-0926-SM-GQ1C6 30-39 years, male 138.5
GTEX-QEG4-2126-SM-GQ1CE 30-39 years, male 137.8
GTEX-RWS6-1426-SM-GPRWQ 60-69 years, female 136.9
GTEX-S4P3-0826-SM-H7OF3 50-59 years, female 136.3
GTEX-OIZI-1926-SM-H7OGY 40-49 years, male 135.6
GTEX-S4UY-0926-SM-4AD6O 40-49 years, female 133.9
GTEX-T5JC-1126-SM-GPIA1 20-29 years, male 132.7
GTEX-R45C-2426-SM-HL11G 60-69 years, female 130.1
GTEX-REY6-2026-SM-GPRYL 60-69 years, male 126.4
GTEX-SNOS-0526-SM-4DM54 40-49 years, male 126.2
GTEX-Q734-1226-SM-GRR21 40-49 years, female 125.4
GTEX-TKQ2-0526-SM-GRR15 50-59 years, male 120.7
GTEX-N7MS-2126-SM-GRR2X 60-69 years, male 119.6
GTEX-RNOR-2126-SM-EXURR 50-59 years, female 116.9
GTEX-SNMC-0826-SM-4DM66 20-29 years, male 115.2
GTEX-U3ZN-1226-SM-4DXUD 30-39 years, female 114.9
GTEX-S4Q7-0926-SM-4AD5D 20-29 years, male 113.4
GTEX-U3ZM-0826-SM-4DXU6 40-49 years, male 110.5
GTEX-TMMY-1526-SM-4DXST 40-49 years, female 110.1
GTEX-OOBJ-1926-SM-GRR1P 60-69 years, male 109.6
GTEX-S3XE-1226-SM-4AD4L 50-59 years, male 107.2
GTEX-U4B1-1226-SM-4DXT7 40-49 years, male 106.9
GTEX-SE5C-1026-SM-4BRUG 40-49 years, female 97.0
Show allShow less

URINARY BLADDER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Bladder
Scaled Tags Per Million: 1.1
FF:10011-101C2 55,58,79 years, mixed 1.1

URINARY BLADDER - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

147.8
Macaque sample Sample description nTPM
Urinary bladder
nTPM: 147.8
Samples: 3

Max nTPM: 158.6
Min nTPM: 137.3
Sample A 137.3
Sample B 147.4
Sample C 158.6

URINARY BLADDER - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.9
Mouse sample Sample description nTPM
Urinary bladder
nTPM: 86.9
Samples: 4

Max nTPM: 102.9
Min nTPM: 70.7
Sample D 102.9
Sample A 74.9
Sample B 99.0
Sample C 70.7

URINARY BLADDER - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

157.5
Rat sample Sample description nTPM
Urinary bladder
nTPM: 157.5
Samples: 4

Max nTPM: 158.5
Min nTPM: 156.8
Sample A 156.8
Sample A 157.5
Sample A 157.3
Sample A 158.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.