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  • TISSUE

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TISSUE URINARY BLADDER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Urinary bladder
Tissue proteome
Tissue methods
URINARY BLADDER - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:513.0 nTPM
HPA:364.5 nTPM
GTEx:513.0 nTPM
FANTOM5:542.7 Scaled Tags Per Million
URINARY BLADDER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

URINARY BLADDER - Annotated protein expression
Pending normal tissue analysis

URINARY BLADDER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

364.5
overview
Male, age 74
Urinary bladder sample 264
nTPM: 260.6
Cell types%
Urothelial cells:
5

Smooth muscle cells:
60

Fibroblasts:
20

Endothelial cells:
10

Other cell types:
5

overview
Male, age 80
Urinary bladder sample 265
nTPM: 266
Cell types%
Urothelial cells:
10

Smooth muscle cells:
45

Fibroblasts:
15

Endothelial cells:
10

Other cell types:
20

N/A
Female, age 0.1
Urinary bladder sample 1597
nTPM: 454
N/A
Female, age 0.1
Urinary bladder sample 1598
nTPM: 477.2

URINARY BLADDER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

513.0
GTEx sample id Sample description nTPM
Bladder
Average nTPM: 513.0
Samples: 77

Max nTPM: 776.7
Min nTPM: 366.7
Std nTPM: 89.3
Median nTPM: 487.4
GTEX-T5JC-1126-SM-GPIA1 20-29 years, male 776.7
GTEX-R45C-2426-SM-HL11G 60-69 years, female 737.0
GTEX-OOBJ-1926-SM-GRR1P 60-69 years, male 712.1
GTEX-QDT8-2826-SM-GOQYY 30-39 years, female 692.2
GTEX-P4QS-1926-SM-GQ1BY 60-69 years, male 667.7
GTEX-QEL4-1826-SM-EZ6KU 50-59 years, male 662.1
GTEX-QV31-0926-SM-GQ1C6 30-39 years, male 655.8
GTEX-Q734-1226-SM-GRR21 40-49 years, female 644.3
GTEX-PLZ6-1026-SM-GQ1C8 30-39 years, male 617.2
GTEX-QEG5-2326-SM-GRR2Z 20-29 years, male 615.6
GTEX-SE5C-1026-SM-4BRUG 40-49 years, female 614.3
GTEX-OHPK-1926-SM-H7OF2 50-59 years, female 598.9
GTEX-REY6-2026-SM-GPRYL 60-69 years, male 588.3
GTEX-RWS6-1426-SM-GPRWQ 60-69 years, female 587.7
GTEX-QLQ7-1226-SM-GOQYE 60-69 years, male 584.4
GTEX-NPJ8-1126-SM-GNTAI 40-49 years, male 582.9
GTEX-PLZ5-1326-SM-GQ1C2 50-59 years, male 577.5
GTEX-RN64-2426-SM-EZ6L2 50-59 years, male 572.4
GTEX-P78B-2126-SM-GQ1C3 40-49 years, female 567.8
GTEX-OIZI-1926-SM-H7OGY 40-49 years, male 564.5
GTEX-S33H-1926-SM-EYYVH 30-39 years, male 560.8
GTEX-QDVN-1426-SM-GPRWL 50-59 years, male 557.8
GTEX-T2IS-2526-SM-GRR23 20-29 years, female 555.3
GTEX-T5JW-1026-SM-EZ6LR 20-29 years, female 554.9
GTEX-S4P3-0826-SM-H7OF3 50-59 years, female 554.3
GTEX-S95S-0626-SM-EZ6L8 60-69 years, male 548.5
GTEX-T6MN-2226-SM-EVYAM 50-59 years, male 546.5
GTEX-QCQG-0826-SM-GPI8H 50-59 years, female 543.5
GTEX-OXRK-1926-SM-GRR1N 50-59 years, female 543.3
GTEX-QDVJ-1526-SM-GPI84 50-59 years, male 542.0
GTEX-RM2N-1026-SM-GOQY8 50-59 years, male 541.7
GTEX-U3ZM-0826-SM-4DXU6 40-49 years, male 539.8
GTEX-P4PQ-1926-SM-GRR14 60-69 years, male 536.8
GTEX-R55C-1226-SM-GOQY7 40-49 years, male 535.7
GTEX-T6MO-0926-SM-GPRWN 40-49 years, female 528.9
GTEX-T8EM-1726-SM-GPRWO 40-49 years, male 505.6
GTEX-P44H-2226-SM-E9U4P 40-49 years, male 499.2
GTEX-RWSA-2126-SM-H7OG7 40-49 years, male 488.2
GTEX-SUCS-1226-SM-GPI9A 70-79 years, male 487.4
GTEX-S7SF-1126-SM-GQ1CH 20-29 years, female 487.1
GTEX-Q2AH-1326-SM-GPRWF 40-49 years, male 486.5
GTEX-RNOR-2126-SM-EXURR 50-59 years, female 486.2
GTEX-S4UY-0926-SM-4AD6O 40-49 years, female 483.1
GTEX-OIZH-1926-SM-GPRXO 50-59 years, male 482.9
GTEX-POMQ-0926-SM-H6Q6H 20-29 years, female 481.8
GTEX-SNMC-0826-SM-4DM66 20-29 years, male 477.7
GTEX-QLQW-0826-SM-H7OG2 30-39 years, male 474.6
GTEX-P4PP-1926-SM-HAUZM 30-39 years, female 466.8
GTEX-TKQ2-0526-SM-GRR15 50-59 years, male 464.8
GTEX-N7MT-1826-SM-GQ1C9 60-69 years, female 462.2
GTEX-TMMY-1526-SM-4DXST 40-49 years, female 459.1
GTEX-N7MS-2126-SM-GRR2X 60-69 years, male 458.9
GTEX-OIZF-1926-SM-7PBZS 60-69 years, male 457.9
GTEX-QMRM-1326-SM-HAUYS 50-59 years, male 456.7
GTEX-P4QT-1926-SM-HAUYQ 50-59 years, female 453.9
GTEX-OHPM-1926-SM-H7OG1 50-59 years, male 449.1
GTEX-QV44-1426-SM-GPI8D 50-59 years, male 446.2
GTEX-R55G-1326-SM-HAUYU 40-49 years, female 444.2
GTEX-QEG4-2126-SM-GQ1CE 30-39 years, male 443.4
GTEX-U3ZN-1226-SM-4DXUD 30-39 years, female 441.5
GTEX-QXCU-2226-SM-GPI87 50-59 years, male 439.7
GTEX-RUSQ-1326-SM-GQ1EA 50-59 years, male 436.9
GTEX-S32W-1126-SM-4AD5V 50-59 years, female 434.4
GTEX-U3ZH-0826-SM-H6Q7I 30-39 years, male 431.4
GTEX-U4B1-1226-SM-4DXT7 40-49 years, male 429.2
GTEX-PW2O-1026-SM-GPRWA 20-29 years, male 426.1
GTEX-PWCY-1126-SM-H7OGX 20-29 years, female 425.7
GTEX-O5YT-1926-SM-H6Q82 20-29 years, male 414.1
GTEX-SNOS-0526-SM-4DM54 40-49 years, male 412.6
GTEX-S3XE-1226-SM-4AD4L 50-59 years, male 410.0
GTEX-PX3G-1926-SM-GQ1ED 20-29 years, female 395.5
GTEX-OOBK-1926-SM-HAUZL 40-49 years, male 393.8
GTEX-Q2AI-1026-SM-GRR3I 40-49 years, male 387.8
GTEX-S4Q7-0926-SM-4AD5D 20-29 years, male 386.1
GTEX-R53T-1426-SM-H7OG3 50-59 years, female 383.6
GTEX-PWN1-1926-SM-HAUZN 40-49 years, female 376.7
GTEX-OHPL-1926-SM-HAV18 60-69 years, female 366.7
Show allShow less

URINARY BLADDER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

542.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Bladder
Scaled Tags Per Million: 542.7
FF:10011-101C2 55,58,79 years, mixed 542.7

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