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  • TISSUE

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  • VSTM2A
TISSUE HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:18.7 nTPM
HPA Brain:62.5 nTPM
GTEx:18.7 nTPM
Pig:81.9 nTPM
Mouse:145.3 nTPM
Allen mouse:3.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 33.5
1961 Female, age 42, unknown 35.6
2226 Male, age 75, left hemisphere 31.4
Dorsomedial nucleus
nTPM: 26.3
2017 Female, age 42, unknown 32.9
2041 Female, age 72, unknown 27.4
1989 Male, age 62, unknown 18.7
Lateral hypothalamic area
nTPM: 50.1
2228 Male, age 66, unknown 84.0
2412 Male, age 62, unknown 46.5
1791 Male, age 80, right hemisphere 37.3
2271 Male, age 75, both hemispheres 32.4
Mammillary body
nTPM: 7.8
1945 Male, age 80, right hemisphere 17.5
2413 Male, age 66, unknown 9.8
1948 Female, age 72, unknown 5.7
1923 Female, age 72, unknown 3.2
1834 Female, age 42, unknown 3.0
Paraventricular nucleus
nTPM: 30.7
2700 Male, age 62, unknown 30.7
Preoptic area
nTPM: 42.2
1907 Male, age 80, right hemisphere 56.4
1861 Female, age 42, unknown 47.2
2414 Female, age 72, unknown 23.0
Supraoptic nucleus
nTPM: 27.1
2835 Female, age 72, unknown 40.9
1894 Female, age 72, unknown 24.1
2043 Male, age 62, unknown 16.5
Ventromedial nucleus
nTPM: 62.5
1982 Female, age 72, unknown 80.0
1822 Female, age 42, unknown 45.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 18.7
Samples: 257

Max nTPM: 75.3
Min nTPM: 0.8
Std nTPM: 11.9
Median nTPM: 16.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 75.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 59.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 56.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 56.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 54.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 51.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 49.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 47.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 44.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 42.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 42.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 40.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 37.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 36.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 36.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 36.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 36.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 35.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 35.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 35.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 35.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 35.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 35.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 35.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 34.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 34.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 34.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 34.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 33.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 33.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 33.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 33.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 33.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 32.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 31.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 31.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 31.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 31.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 31.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 30.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 30.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 30.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 29.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 29.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 29.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 28.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 28.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 28.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 28.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 28.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 28.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 28.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 27.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 27.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 27.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 26.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 26.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 26.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 26.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 26.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 26.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 26.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 25.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 25.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 25.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 25.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 25.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 25.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 24.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 24.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 24.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 24.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 23.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 23.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 23.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 22.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 22.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 22.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 22.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 22.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 22.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 22.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 22.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 22.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 22.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 22.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 21.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 21.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 21.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 21.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 21.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 21.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 20.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 20.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 20.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 20.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 20.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 19.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 19.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 19.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 19.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 19.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 19.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 18.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 18.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 18.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 18.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 18.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 18.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 18.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 18.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 18.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 18.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 18.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 18.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 18.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 18.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 18.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 17.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 17.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 17.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 17.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 17.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 17.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 17.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 17.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 17.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 16.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 16.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 16.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 16.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 16.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 16.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 16.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 15.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 15.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 15.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 15.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 15.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 15.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 15.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 15.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 14.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 14.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 14.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 14.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 14.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 14.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 14.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 14.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 13.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 13.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 13.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 13.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 13.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 13.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 13.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 13.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 13.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 12.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 12.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 12.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 12.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 12.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 12.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 12.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 12.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 12.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 12.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 12.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 12.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 12.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 12.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 11.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 11.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 11.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 11.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 11.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 11.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 11.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 11.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 11.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 10.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 10.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 10.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 10.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 10.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 10.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 10.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 9.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 9.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 9.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 9.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 9.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 9.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 9.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 9.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 9.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 8.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 8.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 8.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 8.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 8.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 8.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 8.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 8.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 8.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 8.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 7.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 7.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 7.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 7.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 7.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 7.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 7.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 7.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 7.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 7.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 7.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 6.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 6.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 6.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 6.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 6.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 6.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 6.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 6.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 5.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 5.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 5.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 5.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 5.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 5.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 5.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 5.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 4.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 4.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 4.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 4.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 4.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 4.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 4.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 4.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 4.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 4.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 3.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 3.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 3.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 3.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 3.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 3.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 3.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 1.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 1.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 1.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 0.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 81.9
Samples: 4

Max nTPM: 112.4
Min nTPM: 65.8
Sample A Female 112.4
Sample B Female 65.8
Sample C Male 80.0
Sample D Male 69.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

145.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 145.3
Samples: 4

Max nTPM: 154.3
Min nTPM: 127.5
Sample A Male 127.5
Sample B Male 148.8
Sample C Female 154.3
Sample D Female 150.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.6
71836843 Antisense, RP_051017_02_C06, Mouse strain C57BL/6J (56 days, male) 6.2
68157400 Antisense, RP_041116_02_E03, Mouse strain C57BL/6J (56 days, male) 1.0

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