HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:354.7 nTPM
HPA Brain:26.8 nTPM
GTEx:354.7 nTPM
FANTOM5:256.0 Scaled Tags Per Million
Mouse:261.0 nTPM
Allen mouse:1.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046976
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 26.8
Sample id Sample description nTPM
Hippocampus
nTPM: 21.9
1855 Male, age 76, left hemisphere 27.0
2148 Female, age 91, left hemisphere 23.7
2529 Female, age 94, left hemisphere 22.7
1911 Female, age 85, right hemisphere 20.4
2621 Female, age 67, right hemisphere 20.4
1898 Male, age 80, left hemisphere 17.2
Dentate gyrus
nTPM: 21.2
2531 Female, age 67, both hemispheres 30.4
2528 Male, age 74, both hemispheres 24.7
1927 Female, age 91, both hemispheres 20.4
2530 Female, age 94, left hemisphere 18.7
2246 Female, age 85, both hemispheres 17.4
2010 Male, age 76, both hemispheres 15.5
Entorhinal gyrus
nTPM: 20.5
1938 Female, age 85, left hemisphere 27.0
2686 Male, age 75, right hemisphere 23.7
2117 Female, age 91, right hemisphere 21.3
2613 Female, age 94, left hemisphere 19.6
2764 Male, age 80, right hemisphere 16.4
1787 Male, age 76, left hemisphere 14.8
Hippocampus, CA1
nTPM: 24.2
2082 Female, age 91, right hemisphere 27.1
2045 Male, age 76, both hemispheres 25.5
1873 Female, age 85, both hemispheres 23.6
2749 Male, age 80, left hemisphere 23.5
2527 Male, age 74, both hemispheres 21.1
Hippocampus, CA2
nTPM: 21.5
1940 Female, age 85, left hemisphere 30.7
2113 Female, age 91, right hemisphere 27.1
2249 Male, age 74, both hemispheres 23.6
2437 Female, age 94, left hemisphere 18.1
1892 Male, age 76, both hemispheres 17.1
1963 Male, age 80, left hemisphere 12.5
Hippocampus, CA3
nTPM: 26.8
2620 Female, age 94, left hemisphere 44.1
2861 Female, age 67, both hemispheres 36.0
1891 Female, age 85, both hemispheres 24.4
2436 Male, age 74, both hemispheres 23.9
1867 Male, age 76, both hemispheres 19.1
2137 Male, age 80, left hemisphere 13.3
Parahippocampal cortex
nTPM: 21.5
2622 Female, age 67, right hemisphere 27.5
2692 Male, age 74, both hemispheres 27.2
2532 Female, age 72, left hemisphere 22.4
1850 Male, age 80, both hemispheres 22.2
1933 Female, age 85, both hemispheres 22.2
2250 Female, age 67, right hemisphere 21.8
2693 Female, age 94, both hemispheres 20.6
1990 Female, age 91, right hemisphere 18.8
2018 Male, age 76, both hemispheres 17.7
2245 Female, age 91, both hemispheres 14.3
Perirhinal gyrus
nTPM: 16.6
2521 Female, age 94, right hemisphere 20.8
1841 Female, age 85, right hemisphere 17.6
2848 Male, age 76, right hemisphere 16.8
1794 Male, age 80, right hemisphere 16.2
1847 Female, age 91, left hemisphere 11.5
Subiculum
nTPM: 23.8
2438 Female, age 94, left hemisphere 32.8
2619 Male, age 74, both hemispheres 29.4
2729 Female, age 91, right hemisphere 26.4
1977 Female, age 85, both hemispheres 25.2
2042 Male, age 76, both hemispheres 17.1
1901 Male, age 80, both hemispheres 11.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 354.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 354.7
Samples: 255

Max nTPM: 1195.2
Min nTPM: 106.3
Std nTPM: 135.4
Median nTPM: 331.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1195.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 813.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 752.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 695.2
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 674.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 673.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 664.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 651.6
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 629.6
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 628.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 627.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 256.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 256.0
FF:10169-103B7 60 years, female 355.1
FF:10153-102I9 76 years, female 156.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 261.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 235.9
Samples: 4

Max nTPM: 265.3
Min nTPM: 216.5
Sample A Male 216.5
Sample B Male 223.2
Sample C Female 265.3
Sample D Female 238.7
Hippocampal formation
nTPM: 261.0
Samples: 4

Max nTPM: 300.6
Min nTPM: 246.4
Sample A Male 300.6
Sample B Male 246.4
Sample C Female 248.8
Sample D Female 248.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
73716566 Antisense, RP_051206_03_C11, Mouse strain C57BL/6J (56 days, male) 1.6

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo