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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • TPPP
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:244.9 nTPM
GTEx:93.1 nTPM
FANTOM5:110.9 Scaled Tags Per Million
Macaque:92.3 nTPM
Pig:57.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

244.9
Sample id Sample description nTPM
Putamen
nTPM: 244.9
2647 Male, age 75, left hemisphere 390.7
1829 Male, age 74, unknown 274.9
2489 Female, age 72, unknown 264.5
2482 Female, age 94, left hemisphere 227.0
1937 Female, age 91, right hemisphere 212.5
2466 Female, age 79, unknown 204.2
1838 Male, age 80, right hemisphere 140.3

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.1
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 93.1
Samples: 254

Max nTPM: 237.4
Min nTPM: 28.1
Std nTPM: 31.3
Median nTPM: 90.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 237.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 201.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 172.9
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 170.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 161.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 160.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 160.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 155.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 153.5
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 151.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 149.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 146.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 146.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 146.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 144.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 141.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 139.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 139.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 138.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 138.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 137.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 137.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 135.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 134.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 133.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 132.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 132.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 129.5
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 129.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 129.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 129.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 128.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 128.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 128.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 126.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 124.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 124.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 123.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 123.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 122.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 122.4
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 122.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 121.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 121.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 121.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 120.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 120.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 116.9
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 116.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 116.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 116.5
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 116.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 116.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 116.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 114.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 114.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 114.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 113.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 113.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 113.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 113.2
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 113.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 113.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 112.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 112.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 112.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 112.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 111.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 110.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 109.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 109.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 109.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 109.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 109.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 109.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 108.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 107.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 107.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 106.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 106.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 106.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 106.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 106.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 105.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 105.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 104.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 104.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 104.4
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 104.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 103.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 103.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 103.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 103.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 102.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 102.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 101.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 101.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 101.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 101.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 100.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 100.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 100.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 98.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 98.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 98.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 98.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 97.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 97.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 96.9
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 96.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 95.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 95.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 94.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 94.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 94.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 94.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 93.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 93.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 92.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 92.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 92.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 91.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 91.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 91.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 91.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 91.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 91.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 90.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 90.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 90.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 89.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 89.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 89.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 89.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 87.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 87.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 87.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 87.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 87.0
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 86.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 86.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 85.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 84.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 84.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 84.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 84.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 83.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 83.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 82.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 82.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 82.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 82.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 81.9
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 81.8
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 81.7
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 81.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 81.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 81.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 81.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 81.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 81.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 81.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 80.9
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 80.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 80.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 79.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 79.4
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 79.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 78.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 78.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 78.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 78.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 77.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 77.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 77.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 76.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 76.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 76.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 75.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 75.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 75.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 75.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 74.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 74.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 74.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 73.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 73.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 72.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 72.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 72.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 72.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 71.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 71.7
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 71.6
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 71.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 71.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 70.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 70.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 70.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 69.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 69.1
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 68.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 67.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 67.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 66.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 66.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 66.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 65.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 63.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 63.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 62.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 62.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 62.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 61.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 61.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 61.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 59.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 59.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 59.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 58.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 58.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 56.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 56.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 56.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 56.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 56.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 56.1
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 56.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 55.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 55.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 55.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 53.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 53.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 52.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 51.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 50.4
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 49.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 49.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 48.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 46.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 44.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 43.9
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 43.9
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 42.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 41.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 40.3
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 39.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 39.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 39.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 38.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 33.1
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 30.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 29.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 28.1
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

110.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 110.9
FF:10176-103C5 60 years, female 110.9

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.3
Macaque sample Sample description nTPM
Putamen
nTPM: 92.4
Samples: 2

Max nTPM: 92.6
Min nTPM: 92.1
Sample A 92.6
Sample B 92.1

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.1
Pig sample Sample description nTPM
Putamen
nTPM: 57.1
Samples: 3

Max nTPM: 70.6
Min nTPM: 44.7
Sample B Female 44.7
Sample C Male 56.0
Sample D Male 70.6

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