ENC1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • ENC1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:85.9 nTPM
GTEx:28.7 nTPM
FANTOM5:110.6 Scaled Tags Per Million
Macaque:147.2 nTPM
Pig:191.2 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.9
Sample id Sample description nTPM
Putamen
nTPM: 85.9
2466 Female, age 79, unknown 149.0
1829 Male, age 74, unknown 111.8
1838 Male, age 80, right hemisphere 78.4
1937 Female, age 91, right hemisphere 76.4
2647 Male, age 75, left hemisphere 71.8
2482 Female, age 94, left hemisphere 58.7
2489 Female, age 72, unknown 55.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.7
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 28.7
Samples: 254

Max nTPM: 107.6
Min nTPM: 0.8
Std nTPM: 22.2
Median nTPM: 23.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 107.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 101.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 99.0
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 83.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 80.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 76.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 75.4
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 74.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 72.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 72.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 71.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 70.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 69.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 69.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 69.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 67.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 66.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 66.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 65.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 65.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 65.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 64.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 62.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 61.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 60.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 60.4
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 59.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 58.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 57.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 57.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 57.4
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 56.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 56.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 56.6
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 56.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 56.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 55.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 55.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 55.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 54.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 54.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 54.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 53.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 53.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 52.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 51.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 50.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 50.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 49.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 49.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 49.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 48.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 48.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 47.9
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 47.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 47.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 46.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 45.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 45.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 43.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 43.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 42.9
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 42.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 42.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 42.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 41.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 41.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 41.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 41.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 40.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 40.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 40.1
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 39.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 39.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 39.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 39.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 39.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 38.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 38.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 37.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 37.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 37.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 37.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 37.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 37.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 35.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 35.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 35.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 35.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 35.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 35.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 34.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 34.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 33.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 33.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 32.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 32.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 32.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 31.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 31.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 30.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 30.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 29.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 29.8
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 29.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 29.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 28.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 28.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 27.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 27.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 26.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 26.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 26.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 26.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 26.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 26.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 26.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 26.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 25.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 25.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 24.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 24.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 24.1
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 23.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 23.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 23.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 23.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 23.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 22.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 22.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 22.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 22.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 22.7
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 22.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 22.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 22.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 22.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 22.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 21.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 21.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 21.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 21.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 21.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 20.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 20.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 20.5
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 20.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 20.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 19.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 19.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 19.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 19.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 18.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 18.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 18.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 17.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 17.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 17.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 16.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 16.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 16.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 15.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 15.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 15.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 14.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 14.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 14.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 14.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 14.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 14.2
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 14.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 13.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 13.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 12.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 12.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 12.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 12.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 12.6
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 12.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 12.0
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 11.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 11.7
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 11.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 10.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 10.4
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 10.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 10.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 10.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 9.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 9.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 9.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 9.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 8.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 8.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 7.8
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 7.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 7.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 7.7
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 7.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 7.4
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 7.3
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 7.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 7.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 7.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 6.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 6.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 6.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 6.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 6.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 6.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 6.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 5.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 5.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 5.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 5.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 5.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 5.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 5.2
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 5.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 4.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 4.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 4.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 4.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 4.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 4.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 4.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 4.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 4.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 4.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 4.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 4.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 4.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 3.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 3.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 3.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 3.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 3.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 3.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 3.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 3.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 3.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 2.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 2.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 2.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 2.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 2.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 2.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 2.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 1.8
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 1.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 1.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 0.8
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

110.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 110.6
FF:10176-103C5 60 years, female 110.6

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

147.2
Macaque sample Sample description nTPM
Putamen
nTPM: 147.2
Samples: 2

Max nTPM: 163.4
Min nTPM: 131.0
Sample A 163.4
Sample B 131.0

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

191.2
Pig sample Sample description nTPM
Putamen
nTPM: 191.1
Samples: 3

Max nTPM: 250.7
Min nTPM: 146.9
Sample B Female 146.9
Sample C Male 250.7
Sample D Male 175.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.