HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:1229.1 nTPM
HPA Brain:337.1 nTPM
GTEx:1229.1 nTPM
FANTOM5:291.9 Scaled Tags Per Million
Pig:432.2 nTPM
Mouse:1391.5 nTPM
Allen mouse:7.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003371
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 337.1
Sample id Sample description nTPM
Hippocampus
nTPM: 287.6
2529 Female, age 94, left hemisphere 396.7
1898 Male, age 80, left hemisphere 376.2
1911 Female, age 85, right hemisphere 291.2
2148 Female, age 91, left hemisphere 236.0
2621 Female, age 67, right hemisphere 232.6
1855 Male, age 76, left hemisphere 192.9
Dentate gyrus
nTPM: 295.7
2530 Female, age 94, left hemisphere 378.1
2010 Male, age 76, both hemispheres 330.1
1927 Female, age 91, both hemispheres 283.3
2528 Male, age 74, both hemispheres 279.8
2246 Female, age 85, both hemispheres 267.4
2531 Female, age 67, both hemispheres 235.8
Entorhinal gyrus
nTPM: 277.9
1787 Male, age 76, left hemisphere 333.0
2764 Male, age 80, right hemisphere 306.9
2117 Female, age 91, right hemisphere 306.1
1938 Female, age 85, left hemisphere 282.8
2686 Male, age 75, right hemisphere 255.1
2613 Female, age 94, left hemisphere 183.5
Hippocampus, CA1
nTPM: 300.3
2749 Male, age 80, left hemisphere 390.0
2082 Female, age 91, right hemisphere 309.5
2527 Male, age 74, both hemispheres 286.6
1873 Female, age 85, both hemispheres 276.7
2045 Male, age 76, both hemispheres 238.3
Hippocampus, CA2
nTPM: 337.1
1963 Male, age 80, left hemisphere 450.5
1892 Male, age 76, both hemispheres 394.3
2437 Female, age 94, left hemisphere 342.1
2249 Male, age 74, both hemispheres 312.8
2113 Female, age 91, right hemisphere 274.7
1940 Female, age 85, left hemisphere 248.6
Hippocampus, CA3
nTPM: 260.0
1867 Male, age 76, both hemispheres 385.6
1891 Female, age 85, both hemispheres 306.3
2137 Male, age 80, left hemisphere 298.7
2436 Male, age 74, both hemispheres 218.5
2861 Female, age 67, both hemispheres 215.7
2620 Female, age 94, left hemisphere 135.1
Parahippocampal cortex
nTPM: 274.6
2250 Female, age 67, right hemisphere 402.8
2018 Male, age 76, both hemispheres 400.3
1990 Female, age 91, right hemisphere 300.3
1933 Female, age 85, both hemispheres 289.7
2245 Female, age 91, both hemispheres 276.8
1850 Male, age 80, both hemispheres 275.6
2532 Female, age 72, left hemisphere 240.7
2693 Female, age 94, both hemispheres 196.0
2692 Male, age 74, both hemispheres 194.6
2622 Female, age 67, right hemisphere 168.9
Perirhinal gyrus
nTPM: 312.6
1794 Male, age 80, right hemisphere 374.2
1847 Female, age 91, left hemisphere 331.6
1841 Female, age 85, right hemisphere 324.4
2521 Female, age 94, right hemisphere 270.2
2848 Male, age 76, right hemisphere 262.7
Subiculum
nTPM: 287.1
1977 Female, age 85, both hemispheres 407.2
2042 Male, age 76, both hemispheres 312.8
1901 Male, age 80, both hemispheres 286.3
2438 Female, age 94, left hemisphere 266.5
2729 Female, age 91, right hemisphere 250.6
2619 Male, age 74, both hemispheres 199.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1229.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1229.1
Samples: 255

Max nTPM: 5586.1
Min nTPM: 568.8
Std nTPM: 517.7
Median nTPM: 1108.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 5586.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2986.6
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 2753.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2652.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 2636.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 2585.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 2581.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2425.3
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 2398.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2282.8
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 2224.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 291.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 291.9
FF:10169-103B7 60 years, female 342.7
FF:10153-102I9 76 years, female 241.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 432.2
Pig sample Sample description nTPM
Subiculum
nTPM: 335.5
Samples: 4

Max nTPM: 493.0
Min nTPM: 246.1
Sample A Female 493.0
Sample B Female 314.6
Sample C Male 246.1
Sample D Male 288.3
Dorsal hippocampus
nTPM: 432.2
Samples: 4

Max nTPM: 625.3
Min nTPM: 260.5
Sample A Female 625.3
Sample B Female 374.9
Sample C Male 468.0
Sample D Male 260.5
Entorhinal cortex
nTPM: 381.2
Samples: 4

Max nTPM: 534.2
Min nTPM: 256.0
Sample A Female 307.2
Sample B Female 534.2
Sample C Male 427.4
Sample D Male 256.0
Ventral hippocampus
nTPM: 380.4
Samples: 4

Max nTPM: 429.0
Min nTPM: 323.2
Sample A Female 406.6
Sample B Female 323.2
Sample C Male 429.0
Sample D Male 362.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1391.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1391.6
Samples: 4

Max nTPM: 1496.6
Min nTPM: 1213.9
Sample A Male 1475.9
Sample B Male 1496.6
Sample C Female 1379.8
Sample D Female 1213.9
Hippocampal formation
nTPM: 1332.8
Samples: 4

Max nTPM: 1458.2
Min nTPM: 1208.2
Sample A Male 1458.2
Sample B Male 1286.7
Sample C Female 1208.2
Sample D Female 1377.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.0
74425523 Antisense, RP_051214_02_E09, Mouse strain C57BL/6J (56 days, male) 9.3
68545854 Antisense, RP_050120_01_F03, Mouse strain C57BL/6J (56 days, male) 4.6

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