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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1297.8 nTPM
HPA:1167.5 nTPM
GTEx:1297.8 nTPM
FANTOM5:1036.9 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA003371
Glandular cells Medium



SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1167.5
overview
Female, age 68
Salivary gland sample 216
nTPM: 1412.8
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 1015.7
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 1074
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1297.8
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 1297.8
Samples: 181

Max nTPM: 3550.7
Min nTPM: 696.1
Std nTPM: 327.1
Median nTPM: 1251.2
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 3550.7
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 2633.0
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 2126.2
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 2114.4
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 2056.6
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 1978.1
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 1953.9
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 1949.5
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 1898.8
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 1886.1
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 1859.8
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 1799.9
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 1774.8
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 1767.8
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 1713.0
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 1705.4
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 1696.3
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 1690.2
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 1654.0
GTEX-146FR-1226-SM-5MR78 60-69 years, female 1642.0
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 1641.3
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 1623.5
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 1609.3
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 1604.0
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 1584.7
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 1584.2
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 1556.0
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 1550.1
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 1517.6
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 1514.6
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 1509.0
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 1507.2
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 1487.4
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 1480.4
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 1467.2
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 1453.7
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 1445.4
GTEX-11P82-0926-SM-5986X 20-29 years, male 1433.6
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 1430.2
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 1424.3
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 1423.6
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 1417.2
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 1404.2
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 1384.4
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 1380.3
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 1379.2
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 1376.9
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 1376.6
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 1375.9
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 1375.1
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 1373.7
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 1371.3
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 1370.4
GTEX-1445S-2926-SM-5O993 60-69 years, male 1369.6
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 1368.4
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 1366.5
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 1363.5
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 1358.9
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 1354.2
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 1353.5
GTEX-X261-2426-SM-4PQZU 50-59 years, male 1350.8
GTEX-Y111-2626-SM-4TT24 50-59 years, male 1349.1
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 1347.3
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 1343.8
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 1338.9
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 1338.4
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 1327.1
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 1324.2
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 1321.7
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 1316.1
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 1310.0
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 1308.3
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 1295.2
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 1290.1
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 1287.4
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 1280.0
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 1275.4
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 1269.0
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 1268.7
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 1265.4
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 1261.1
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 1259.2
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 1257.6
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 1255.5
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 1255.2
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 1255.0
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 1254.5
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 1253.2
GTEX-13113-1526-SM-5EGHV 60-69 years, female 1252.3
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 1251.2
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 1251.2
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 1248.0
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 1246.3
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 1246.0
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 1236.4
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 1230.0
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 1229.0
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 1228.2
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 1224.9
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 1216.0
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 1215.8
GTEX-15SHV-2226-SM-6M464 60-69 years, male 1211.5
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 1211.1
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 1208.0
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 1206.6
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 1205.3
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 1205.2
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 1203.9
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 1203.5
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 1201.8
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 1198.7
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 1198.4
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 1188.3
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 1185.8
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 1177.7
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 1172.7
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 1172.2
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 1171.6
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 1166.7
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 1162.6
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 1159.3
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 1157.8
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 1156.4
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 1154.7
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 1150.6
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 1137.3
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 1127.9
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 1124.3
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 1115.3
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 1105.4
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 1104.3
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 1104.3
GTEX-13O21-1926-SM-5MR39 50-59 years, male 1098.7
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 1097.2
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 1092.8
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 1089.9
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 1086.2
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 1085.9
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 1085.7
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 1080.8
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 1075.8
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 1075.4
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 1071.4
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 1064.2
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 1059.1
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 1056.2
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 1055.1
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 1051.5
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 1050.4
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 1048.3
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 1047.4
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 1046.3
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 1045.3
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 1039.8
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 1034.5
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 1027.3
GTEX-1B932-0626-SM-731EM 40-49 years, female 1024.6
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 1023.9
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 1018.9
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 1012.6
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 1003.4
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 1001.9
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 994.7
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 983.9
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 974.2
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 968.5
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 955.9
GTEX-178AV-1426-SM-6LLID 40-49 years, male 945.1
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 943.4
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 943.3
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 942.3
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 936.4
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 917.2
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 910.8
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 906.7
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 873.9
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 868.2
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 867.7
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 834.2
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 779.5
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 696.1
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1036.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 1036.9
FF:10199-103F1 23 years, male 1036.9
Salivary gland
Scaled Tags Per Million: 996.8
FF:10093-102C3 16-60 years, mixed 996.8
Submaxillary gland
Scaled Tags Per Million: 901.3
FF:10202-103F4 24 years, male 901.3

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