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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

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  • CELL LINE

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  • EVOLUTION

  • RPS7
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:195.4 nTPM
GTEx:641.7 nTPM
FANTOM5:29.3 Scaled Tags Per Million
Pig:444.5 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

195.4
Sample id Sample description nTPM
Putamen
nTPM: 195.4
2466 Female, age 79, unknown 250.1
2482 Female, age 94, left hemisphere 206.5
1937 Female, age 91, right hemisphere 201.4
1838 Male, age 80, right hemisphere 186.0
2489 Female, age 72, unknown 179.3
2647 Male, age 75, left hemisphere 178.6
1829 Male, age 74, unknown 166.3

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

641.7
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 641.7
Samples: 254

Max nTPM: 1379.5
Min nTPM: 359.3
Std nTPM: 155.6
Median nTPM: 616.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1379.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1266.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1127.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1100.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1036.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1027.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 974.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 966.7
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 960.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 955.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 953.1
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 952.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 946.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 931.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 912.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 909.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 907.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 906.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 888.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 877.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 877.4
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 862.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 860.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 860.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 850.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 839.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 839.2
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 839.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 837.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 834.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 821.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 807.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 799.3
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 797.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 794.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 786.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 784.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 782.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 779.6
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 776.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 776.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 775.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 771.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 770.1
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 768.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 767.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 767.6
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 766.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 764.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 762.5
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 760.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 760.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 758.9
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 758.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 755.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 753.3
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 750.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 749.6
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 748.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 748.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 744.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 739.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 734.7
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 729.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 725.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 722.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 720.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 718.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 718.1
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 715.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 714.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 707.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 707.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 706.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 703.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 696.3
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 690.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 690.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 690.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 688.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 685.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 680.1
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 678.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 675.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 671.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 670.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 670.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 666.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 666.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 665.8
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 663.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 662.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 661.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 660.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 659.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 654.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 648.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 646.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 645.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 643.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 642.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 642.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 641.8
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 641.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 640.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 640.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 638.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 638.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 638.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 637.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 637.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 636.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 634.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 633.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 627.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 626.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 626.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 626.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 625.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 624.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 623.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 622.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 621.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 618.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 618.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 617.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 616.2
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 616.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 614.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 613.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 612.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 608.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 607.7
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 606.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 606.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 603.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 602.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 601.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 601.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 601.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 601.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 600.9
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 598.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 597.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 596.0
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 593.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 593.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 591.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 590.7
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 590.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 590.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 586.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 584.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 584.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 584.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 583.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 583.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 583.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 582.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 582.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 582.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 579.9
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 579.6
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 579.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 578.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 577.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 576.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 576.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 574.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 574.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 572.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 571.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 570.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 570.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 563.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 561.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 561.5
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 559.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 559.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 557.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 554.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 554.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 551.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 548.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 546.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 544.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 541.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 538.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 538.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 534.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 531.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 529.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 525.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 524.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 524.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 514.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 513.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 511.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 509.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 508.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 507.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 506.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 506.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 506.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 506.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 505.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 503.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 502.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 501.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 494.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 493.8
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 493.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 491.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 489.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 485.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 481.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 477.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 476.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 475.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 475.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 475.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 474.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 473.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 473.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 473.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 472.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 471.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 469.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 469.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 467.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 466.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 462.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 460.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 456.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 453.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 450.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 450.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 448.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 446.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 443.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 442.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 441.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 440.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 440.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 434.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 427.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 425.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 419.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 419.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 416.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 404.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 404.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 382.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 359.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

29.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 29.3
FF:10176-103C5 60 years, female 29.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

444.5
Pig sample Sample description nTPM
Putamen
nTPM: 444.5
Samples: 3

Max nTPM: 559.4
Min nTPM: 346.6
Sample B Female 346.6
Sample C Male 559.4
Sample D Male 427.5

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