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  • SUMMARY

  • TISSUE

  • BRAIN

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  • BLOOD

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  • STRUCTURE

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  • GAP43
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

83.576
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:309.8 nTPM
HPA Brain:451.9 nTPM
GTEx:309.8 nTPM
Pig:465.3 nTPM
Mouse:564.3 nTPM
Allen mouse:24.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB078783
Hypothalamus mean intensity 83.576
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 38.209
Mammillary nucleus 41.758
Periventricular hypothalamic nucleus 47.467
Supraoptic nucleus 71.390
Tuberal nucleus 44.818
Ventral tuberomammillary nucleus 43.897
Lateral preoptic area 35.670
Medial preoptic area 39.530
Suprachiasmatic nucleus 83.576
Paraventricular hypothalamic nucleus 35.314
Anterior hypothalamic area, central 37.592
Ventral medial hypothalamic nucleus 37.909
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 38.823
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 42.678
Dorsal medial hypothalamic nucleus 38.470
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

451.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 344.4
2226 Male, age 75, left hemisphere 463.2
1961 Female, age 42, unknown 225.7
Dorsomedial nucleus
nTPM: 252.1
1989 Male, age 62, unknown 401.0
2041 Female, age 72, unknown 208.7
2017 Female, age 42, unknown 146.6
Lateral hypothalamic area
nTPM: 451.9
2228 Male, age 66, unknown 704.1
2271 Male, age 75, both hemispheres 602.2
1791 Male, age 80, right hemisphere 292.4
2412 Male, age 62, unknown 208.8
Mammillary body
nTPM: 130.5
2413 Male, age 66, unknown 193.8
1945 Male, age 80, right hemisphere 149.0
1923 Female, age 72, unknown 125.9
1948 Female, age 72, unknown 107.1
1834 Female, age 42, unknown 76.6
Paraventricular nucleus
nTPM: 241.1
2700 Male, age 62, unknown 241.1
Preoptic area
nTPM: 232.3
1907 Male, age 80, right hemisphere 368.7
2414 Female, age 72, unknown 168.6
1861 Female, age 42, unknown 159.5
Supraoptic nucleus
nTPM: 107.2
2835 Female, age 72, unknown 125.2
1894 Female, age 72, unknown 117.1
2043 Male, age 62, unknown 79.3
Ventromedial nucleus
nTPM: 273.1
1982 Female, age 72, unknown 302.4
1822 Female, age 42, unknown 243.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

309.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 309.8
Samples: 257

Max nTPM: 1388.3
Min nTPM: 19.0
Std nTPM: 183.1
Median nTPM: 293.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 1388.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 1387.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1012.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 830.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 715.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 696.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 681.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 653.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 595.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 585.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 583.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 580.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 576.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 575.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 574.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 563.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 561.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 544.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 534.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 522.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 522.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 520.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 518.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 512.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 512.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 507.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 497.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 497.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 497.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 494.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 494.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 493.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 493.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 488.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 483.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 476.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 474.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 472.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 470.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 465.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 461.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 458.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 457.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 455.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 452.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 450.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 448.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 445.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 444.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 443.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 442.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 442.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 437.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 430.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 429.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 427.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 422.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 414.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 414.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 410.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 405.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 405.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 402.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 402.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 397.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 396.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 394.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 393.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 391.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 389.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 388.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 382.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 381.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 381.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 381.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 380.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 380.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 378.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 378.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 378.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 375.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 373.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 372.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 372.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 366.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 365.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 363.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 361.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 358.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 356.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 355.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 352.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 352.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 352.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 351.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 349.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 349.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 349.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 348.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 345.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 343.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 340.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 339.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 336.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 334.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 333.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 333.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 332.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 330.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 326.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 325.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 325.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 322.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 321.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 317.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 316.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 315.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 315.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 313.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 307.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 305.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 305.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 301.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 300.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 299.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 297.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 296.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 294.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 293.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 289.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 286.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 284.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 282.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 278.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 278.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 276.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 275.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 272.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 271.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 271.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 270.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 267.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 266.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 266.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 264.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 261.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 261.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 260.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 257.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 256.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 256.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 254.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 253.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 250.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 249.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 249.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 246.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 243.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 243.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 242.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 241.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 240.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 239.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 237.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 234.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 234.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 232.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 231.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 231.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 224.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 224.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 222.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 220.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 217.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 215.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 213.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 212.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 211.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 208.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 208.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 208.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 201.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 201.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 196.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 196.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 195.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 195.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 193.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 190.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 189.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 188.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 187.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 183.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 182.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 182.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 179.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 178.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 176.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 174.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 171.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 170.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 169.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 168.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 164.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 163.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 161.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 158.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 158.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 153.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 153.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 151.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 150.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 148.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 147.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 144.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 141.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 140.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 139.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 138.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 134.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 134.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 131.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 130.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 126.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 125.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 121.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 116.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 112.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 111.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 110.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 106.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 100.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 98.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 96.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 94.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 91.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 88.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 86.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 81.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 76.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 76.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 75.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 69.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 69.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 68.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 62.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 62.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 59.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 59.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 55.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 53.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 47.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 44.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 42.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 31.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 30.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 19.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

465.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 465.3
Samples: 4

Max nTPM: 670.1
Min nTPM: 339.8
Sample A Female 670.1
Sample B Female 424.0
Sample C Male 339.8
Sample D Male 427.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

564.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 564.3
Samples: 4

Max nTPM: 628.5
Min nTPM: 518.7
Sample A Male 545.6
Sample B Male 628.5
Sample C Female 564.3
Sample D Female 518.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

24.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 24.0
79669511 Antisense, RP_071204_01_C11, Mouse strain C57BL/6J (56 days, male) 26.6
70928270 Antisense, RP_050725_02_C05, Mouse strain C57BL/6J (56 days, male) 21.5

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