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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • IL17D
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN40 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM8 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE13 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL SPINAL CORD ENTORHINAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:102.0 nTPM
GTEx:133.2 nTPM
FANTOM5:19.7 Scaled Tags Per Million
Pig:8.4 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.0
Sample id Sample description nTPM
Putamen
nTPM: 102.0
2482 Female, age 94, left hemisphere 123.8
2489 Female, age 72, unknown 107.4
1829 Male, age 74, unknown 106.6
2647 Male, age 75, left hemisphere 99.1
1937 Female, age 91, right hemisphere 96.7
2466 Female, age 79, unknown 95.8
1838 Male, age 80, right hemisphere 84.5

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

133.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 133.2
Samples: 254

Max nTPM: 299.7
Min nTPM: 18.3
Std nTPM: 46.6
Median nTPM: 124.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 299.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 297.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 277.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 271.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 256.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 255.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 246.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 245.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 245.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 239.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 238.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 223.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 221.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 219.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 215.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 211.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 210.6
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 210.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 208.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 206.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 206.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 204.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 201.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 200.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 196.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 190.0
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 188.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 187.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 186.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 184.1
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 182.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 181.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 181.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 181.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 180.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 180.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 179.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 179.4
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 178.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 177.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 177.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 176.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 175.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 175.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 173.4
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 172.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 172.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 172.4
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 170.9
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 170.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 169.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 168.7
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 168.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 167.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 167.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 167.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 166.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 165.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 164.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 163.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 162.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 162.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 161.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 161.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 161.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 160.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 160.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 159.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 158.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 157.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 155.4
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 154.9
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 152.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 152.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 150.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 148.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 148.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 146.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 146.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 145.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 145.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 145.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 145.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 145.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 144.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 143.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 143.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 143.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 143.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 142.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 142.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 141.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 141.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 140.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 140.4
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 139.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 139.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 138.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 137.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 137.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 137.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 136.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 134.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 133.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 133.3
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 133.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 132.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 132.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 131.6
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 131.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 131.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 130.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 130.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 129.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 129.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 129.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 127.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 127.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 127.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 127.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 126.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 126.0
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 125.8
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 125.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 125.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 124.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 124.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 124.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 123.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 123.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 123.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 121.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 121.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 120.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 119.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 119.7
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 119.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 119.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 118.1
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 117.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 117.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 117.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 116.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 116.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 116.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 116.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 116.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 115.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 115.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 115.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 115.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 115.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 114.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 114.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 113.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 113.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 112.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 112.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 112.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 112.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 111.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 111.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 111.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 111.0
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 111.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 110.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 110.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 110.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 109.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 109.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 109.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 108.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 108.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 108.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 108.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 108.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 107.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 107.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 107.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 107.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 107.0
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 106.9
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 106.6
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 105.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 105.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 105.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 104.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 104.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 104.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 103.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 103.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 102.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 102.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 102.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 101.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 101.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 100.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 99.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 98.5
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 98.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 98.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 97.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 97.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 97.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 96.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 96.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 96.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 94.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 94.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 94.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 94.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 93.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 93.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 93.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 93.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 93.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 92.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 92.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 92.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 90.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 89.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 87.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 87.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 87.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 86.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 85.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 82.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 81.9
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 81.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 81.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 81.6
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 81.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 80.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 80.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 78.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 77.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 76.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 76.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 74.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 72.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 70.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 69.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 65.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 63.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 61.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 59.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 59.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 59.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 57.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 57.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 57.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 53.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 29.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 18.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

19.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 19.7
FF:10176-103C5 60 years, female 19.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.4
Pig sample Sample description nTPM
Putamen
nTPM: 8.4
Samples: 3

Max nTPM: 8.9
Min nTPM: 7.4
Sample B Female 8.9
Sample C Male 7.4
Sample D Male 8.8

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