ARPP21
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • ARPP21
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:596.6 nTPM
GTEx:444.1 nTPM
FANTOM5:2410.6 Scaled Tags Per Million
Macaque:1132.7 nTPM
Pig:1521.2 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

596.6
Sample id Sample description nTPM
Putamen
nTPM: 596.6
1838 Male, age 80, right hemisphere 931.3
1829 Male, age 74, unknown 869.9
1937 Female, age 91, right hemisphere 838.5
2466 Female, age 79, unknown 695.0
2489 Female, age 72, unknown 435.9
2647 Male, age 75, left hemisphere 212.6
2482 Female, age 94, left hemisphere 193.3

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

444.1
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 444.1
Samples: 254

Max nTPM: 1853.2
Min nTPM: 36.6
Std nTPM: 302.2
Median nTPM: 401.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 1853.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1617.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1151.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1147.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1114.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1110.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1052.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 1020.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 1006.0
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 1000.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 996.5
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 983.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 979.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 960.1
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 945.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 945.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 945.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 945.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 936.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 933.9
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 919.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 906.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 900.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 894.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 883.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 881.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 868.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 860.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 849.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 847.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 839.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 836.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 815.6
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 813.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 811.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 801.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 779.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 751.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 749.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 744.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 743.6
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 736.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 732.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 732.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 730.5
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 726.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 720.5
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 718.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 715.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 713.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 705.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 695.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 682.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 667.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 659.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 657.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 656.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 655.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 652.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 651.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 646.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 645.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 637.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 636.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 630.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 630.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 628.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 627.0
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 624.3
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 623.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 623.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 617.1
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 615.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 599.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 597.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 596.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 592.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 584.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 582.7
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 569.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 560.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 557.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 539.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 537.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 536.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 534.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 529.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 527.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 525.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 520.9
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 520.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 518.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 515.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 515.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 507.5
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 507.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 497.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 490.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 487.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 483.8
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 483.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 478.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 477.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 476.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 470.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 468.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 463.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 459.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 459.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 458.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 453.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 453.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 451.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 450.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 447.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 441.0
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 437.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 433.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 431.7
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 431.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 426.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 425.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 425.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 424.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 421.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 413.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 402.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 400.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 398.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 397.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 377.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 373.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 372.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 369.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 367.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 363.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 363.2
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 356.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 356.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 355.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 352.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 346.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 346.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 334.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 333.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 333.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 330.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 329.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 323.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 320.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 315.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 314.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 309.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 307.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 299.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 296.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 293.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 292.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 290.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 289.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 284.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 272.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 270.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 269.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 269.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 267.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 264.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 260.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 258.9
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 253.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 251.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 251.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 245.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 243.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 241.0
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 240.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 240.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 226.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 226.3
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 225.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 223.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 220.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 218.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 218.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 214.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 211.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 211.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 210.9
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 208.7
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 203.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 197.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 192.1
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 189.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 187.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 181.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 178.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 173.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 171.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 171.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 169.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 167.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 163.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 158.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 157.9
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 154.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 152.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 149.8
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 149.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 144.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 139.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 139.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 135.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 134.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 132.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 128.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 126.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 125.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 125.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 123.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 113.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 109.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 109.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 108.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 108.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 106.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 105.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 103.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 102.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 102.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 100.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 98.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 95.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 91.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 89.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 79.8
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 75.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 75.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 71.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 71.5
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 68.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 64.4
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 61.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 61.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 61.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 60.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 59.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 55.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 54.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 49.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 46.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 46.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 44.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 41.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 36.6
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2410.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 2410.6
FF:10176-103C5 60 years, female 2410.6

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1132.7
Macaque sample Sample description nTPM
Putamen
nTPM: 1132.7
Samples: 2

Max nTPM: 1243.6
Min nTPM: 1021.8
Sample A 1021.8
Sample B 1243.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1521.2
Pig sample Sample description nTPM
Putamen
nTPM: 1521.2
Samples: 3

Max nTPM: 1958.6
Min nTPM: 1288.9
Sample B Female 1288.9
Sample C Male 1958.6
Sample D Male 1316.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.