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BETA
  • SUMMARY

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  • C1QB
EVOLUTIONARY SPLEEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Bone marrow & Lymphoid tissues
Evolutionary methods
SPLEEN - Expression summary
Protein expression
Spleeni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in red pulp: Not detected
Cells in white pulp: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1405.0 nTPM
HPA:941.3 nTPM
GTEx:1405.0 nTPM
FANTOM5:5379.5 Scaled Tags Per Million
Mouse:246.9 nTPM
Rat:333.6 nTPM
Pig:1791.6 nTPM
SPLEEN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPLEEN - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA052116
Cells in red pulp Not detected
Cells in white pulp Not detected



SPLEEN - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

941.3
overview
Female, age 60
Spleen sample 236
nTPM: 661.2
Cell types%
Lymphocytes:
40

Macrophages:
30

Endothelial cells:
15

Fibroblasts:
5

Other cell types:
10

overview
Male, age 17
Spleen sample 237
nTPM: 1042.3
Cell types%
Lymphocytes:
40

Macrophages:
35

Endothelial cells:
15

Fibroblasts:
5

Other cell types:
5

overview
Male, age 20
Spleen sample 238
nTPM: 1108
Cell types%
Lymphocytes:
40

Macrophages:
30

Endothelial cells:
15

Fibroblasts:
5

Other cell types:
10

overview
Female, age 19
Spleen sample 239
nTPM: 1001.8
Cell types%
Lymphocytes:
40

Macrophages:
30

Endothelial cells:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 65
Spleen sample 378
nTPM: 893
Cell types%
Lymphocytes:
35

Macrophages:
30

Endothelial cells:
20

Fibroblasts:
10

Other cell types:
5


SPLEEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1405.0
GTEx sample id Sample description nTPM
Spleen
Average nTPM: 1405.0
Samples: 277

Max nTPM: 3751.0
Min nTPM: 28.5
Std nTPM: 753.0
Median nTPM: 1424.6
GTEX-1IDJU-0426-SM-GA8YH 60-69 years, female 3751.0
GTEX-P4QS-0926-SM-48TBS 60-69 years, male 3493.8
GTEX-1M5QR-0126-SM-F2I23 40-49 years, male 3455.7
GTEX-U3ZN-0126-SM-4DXUM 30-39 years, female 3196.0
GTEX-1OFPY-0126-SM-EXOJ3 60-69 years, male 3130.0
GTEX-16XZY-0126-SM-7IGQ9 70-79 years, male 3106.3
GTEX-UJHI-0126-SM-4IHLP 50-59 years, female 3063.9
GTEX-12WSN-0126-SM-5DUX5 40-49 years, male 3051.8
GTEX-VJYA-0126-SM-4KL1P 60-69 years, male 2987.3
GTEX-18D9B-0126-SM-HAV21 60-69 years, male 2874.4
GTEX-ZDTT-1026-SM-5KM19 60-69 years, male 2842.5
GTEX-15RIE-1626-SM-HAUZ7 60-69 years, male 2750.1
GTEX-Y3I4-0126-SM-4TT26 50-59 years, male 2729.7
GTEX-14PJ4-0526-SM-6871G 60-69 years, male 2714.7
GTEX-S3XE-0626-SM-4AD6B 50-59 years, male 2711.1
GTEX-13111-0126-SM-5EGHO 50-59 years, male 2623.4
GTEX-11EQ9-0426-SM-5A5JY 30-39 years, male 2609.8
GTEX-17GQL-0126-SM-72D5Q 60-69 years, male 2607.0
GTEX-1IDJF-1526-SM-GA8ZR 20-29 years, male 2605.7
GTEX-XV7Q-0126-SM-4BRVK 40-49 years, female 2453.8
GTEX-P4PQ-0926-SM-E9U4D 60-69 years, male 2439.9
GTEX-15G1A-0226-SM-H7OFT 30-39 years, male 2438.1
GTEX-16NFA-0226-SM-HAUYF 50-59 years, male 2408.5
GTEX-ZF29-0626-SM-4WKHD 60-69 years, female 2405.4
GTEX-RUSQ-0126-SM-47JWV 50-59 years, male 2400.7
GTEX-13X6H-0726-SM-5Q5BX 50-59 years, female 2383.8
GTEX-ZVZP-0726-SM-59HKA 50-59 years, male 2330.9
GTEX-17F9E-1126-SM-79OMO 50-59 years, male 2325.1
GTEX-U4B1-0526-SM-4DXTK 40-49 years, male 2312.7
GTEX-WY7C-0126-SM-4ONCO 50-59 years, male 2311.0
GTEX-1C475-1126-SM-7MGY7 40-49 years, female 2308.3
GTEX-17F98-0126-SM-7MGW3 40-49 years, female 2230.3
GTEX-S4Z8-0226-SM-4AD5K 60-69 years, male 2221.7
GTEX-PLZ6-0126-SM-48TC6 30-39 years, male 2199.5
GTEX-QDVN-0526-SM-48TZ4 50-59 years, male 2182.7
GTEX-S4Q7-0126-SM-4AD5P 20-29 years, male 2157.1
GTEX-ZLV1-0326-SM-HL9UA 60-69 years, female 2156.9
GTEX-ZZPU-0126-SM-5E446 50-59 years, female 2154.8
GTEX-1MUQO-1326-SM-EV7AE 60-69 years, male 2143.2
GTEX-1KANA-1226-SM-DHXKE 20-29 years, male 2138.9
GTEX-1QP2A-2526-SM-EXOJB 50-59 years, male 2131.8
GTEX-OIZH-0926-SM-48TBR 50-59 years, male 2129.2
GTEX-1R7EU-2026-SM-E9U63 60-69 years, male 2124.8
GTEX-WFON-0126-SM-4LVM9 40-49 years, male 2124.4
GTEX-PW2O-0126-SM-48TC8 20-29 years, male 2103.9
GTEX-1PDJ9-0226-SM-DPRYX 20-29 years, male 2082.5
GTEX-13S86-0126-SM-5S2PI 40-49 years, male 2068.5
GTEX-POMQ-0126-SM-48TD6 20-29 years, female 2068.5
GTEX-132QS-0226-SM-5IFFZ 60-69 years, male 2057.1
GTEX-139YR-0426-SM-5IFFV 50-59 years, male 2049.2
GTEX-ZG7Y-2026-SM-DO91N 50-59 years, male 2048.5
GTEX-Q734-0226-SM-48U1A 40-49 years, female 2043.3
GTEX-ZPIC-0126-SM-DNZZ9 40-49 years, female 2041.1
GTEX-W5WG-0626-SM-4SOID 50-59 years, female 2018.4
GTEX-ZPU1-1026-SM-4YCEQ 40-49 years, male 2015.5
GTEX-11LCK-0126-SM-5A5M5 30-39 years, male 2001.1
GTEX-U3ZH-0126-SM-4DXUK 30-39 years, male 1990.8
GTEX-QMRM-0226-SM-CL55S 50-59 years, male 1947.1
GTEX-ZAB5-0526-SM-5CVMU 50-59 years, male 1927.2
GTEX-OIZF-0926-SM-7MKH7 60-69 years, male 1923.1
GTEX-WXYG-0126-SM-4OND7 50-59 years, female 1920.3
GTEX-P4QT-0926-SM-EZ6KQ 50-59 years, female 1912.3
GTEX-QV44-0126-SM-CJI1X 50-59 years, male 1903.0
GTEX-145MN-0126-SM-5RQHY 30-39 years, male 1901.1
GTEX-144GN-2126-SM-5O99D 50-59 years, male 1878.5
GTEX-1F5PL-2226-SM-7MKHE 40-49 years, female 1864.5
GTEX-15RIF-0526-SM-6LLI2 20-29 years, male 1858.3
GTEX-13PL7-1126-SM-5MR5O 60-69 years, female 1857.9
GTEX-14E6E-1226-SM-5S2R5 30-39 years, male 1853.3
GTEX-1I1GT-0226-SM-GA8ZH 60-69 years, female 1852.9
GTEX-YB5K-1926-SM-4VDT4 40-49 years, female 1838.9
GTEX-ZLWG-0426-SM-4WWFA 50-59 years, female 1828.3
GTEX-1CB4F-0226-SM-7EPHS 60-69 years, male 1826.0
GTEX-13PVR-0326-SM-5RQJY 60-69 years, female 1824.0
GTEX-1JKYR-1126-SM-CGQGJ 20-29 years, male 1821.5
GTEX-18A67-1526-SM-7LG6F 50-59 years, male 1821.3
GTEX-1LVAN-1026-SM-CNNQZ 50-59 years, female 1818.6
GTEX-1AX9K-0226-SM-793CM 50-59 years, male 1815.1
GTEX-X4LF-0226-SM-4QAS8 50-59 years, male 1790.4
GTEX-12BJ1-0726-SM-5EGGF 60-69 years, male 1788.5
GTEX-15DZA-0126-SM-6PAMV 30-39 years, female 1788.4
GTEX-1S82P-1326-SM-HL9SA 60-69 years, female 1777.6
GTEX-15RJ7-0126-SM-6LPJN 40-49 years, male 1774.4
GTEX-12WSJ-0526-SM-5GCOZ 40-49 years, female 1768.6
GTEX-1C4CL-0626-SM-731DM 30-39 years, male 1761.0
GTEX-1NHNU-0226-SM-HK79X 50-59 years, male 1760.1
GTEX-XYKS-0126-SM-HL9TA 60-69 years, female 1741.7
GTEX-ZV6S-0826-SM-5NQ6Z 40-49 years, female 1733.0
GTEX-ZLFU-0526-SM-4WWBN 40-49 years, male 1730.6
GTEX-11NSD-0426-SM-5N9CR 20-29 years, male 1727.0
GTEX-O5YW-0926-SM-HK7A1 50-59 years, male 1716.3
GTEX-14BMU-0426-SM-5P9FI 20-29 years, female 1711.8
GTEX-1F5PK-0726-SM-7MGXN 50-59 years, male 1703.7
GTEX-P4PP-0926-SM-48TBZ 30-39 years, female 1691.5
GTEX-1F75I-0226-SM-7MKHQ 40-49 years, male 1689.9
GTEX-15SHV-0126-SM-6LPIS 60-69 years, male 1662.0
GTEX-1R9K5-1126-SM-EAZ4G 50-59 years, male 1658.8
GTEX-16AAH-0126-SM-HAV23 50-59 years, male 1644.6
GTEX-139T6-0226-SM-5IFGZ 50-59 years, male 1644.3
GTEX-WHWD-0126-SM-4M9Q5 50-59 years, male 1643.8
GTEX-1122O-0526-SM-5N9DM 60-69 years, female 1636.3
GTEX-1R9PM-0126-SM-DPRY6 20-29 years, male 1612.6
GTEX-ZYFG-0726-SM-5GIDX 60-69 years, female 1610.1
GTEX-YEC4-0126-SM-4W21T 40-49 years, male 1607.4
GTEX-OHPL-0926-SM-G9ER4 60-69 years, female 1603.4
GTEX-Y8LW-0126-SM-4VBS1 50-59 years, female 1596.0
GTEX-YB5E-0426-SM-5IFHR 40-49 years, male 1583.5
GTEX-O5YT-0926-SM-48TDG 20-29 years, male 1579.7
GTEX-R55C-0126-SM-48FEQ 40-49 years, male 1578.3
GTEX-1S831-0726-SM-EV79O 20-29 years, male 1569.7
GTEX-QLQW-0126-SM-447BK 30-39 years, male 1569.3
GTEX-QCQG-0226-SM-48U28 50-59 years, female 1559.9
GTEX-ZF2S-0326-SM-4WKGD 50-59 years, female 1558.1
GTEX-11P81-1326-SM-5GU5S 30-39 years, female 1554.8
GTEX-1211K-0426-SM-5FQTP 60-69 years, female 1552.5
GTEX-1IDJD-0726-SM-GA916 30-39 years, male 1535.8
GTEX-13N11-0126-SM-5KM2Z 50-59 years, female 1533.7
GTEX-1JK1U-0126-SM-C1YQY 60-69 years, male 1530.4
GTEX-17HHE-0326-SM-793BH 50-59 years, male 1526.5
GTEX-147F3-0126-SM-5NQBJ 50-59 years, female 1517.8
GTEX-15F5U-0126-SM-6LPKA 40-49 years, male 1505.2
GTEX-14DAR-0326-SM-5S2PS 50-59 years, male 1500.6
GTEX-Y5LM-0326-SM-4VBRN 40-49 years, female 1496.9
GTEX-X3Y1-0126-SM-4PQZA 40-49 years, male 1494.6
GTEX-1H3VY-1526-SM-9WG7S 50-59 years, male 1489.7
GTEX-XPVG-0626-SM-4B65B 50-59 years, male 1489.3
GTEX-QV31-0126-SM-447BP 30-39 years, male 1486.4
GTEX-1399S-0226-SM-5IFFG 30-39 years, female 1483.7
GTEX-13OVK-0426-SM-7KFT8 40-49 years, male 1477.2
GTEX-XAJ8-0126-SM-47JYG 40-49 years, male 1469.0
GTEX-13CF3-0226-SM-5J1NW 60-69 years, female 1466.7
GTEX-14PKU-0526-SM-6871A 40-49 years, female 1458.5
GTEX-15DCE-0126-SM-HAV2T 20-29 years, male 1456.3
GTEX-YFCO-0926-SM-5LUA5 40-49 years, male 1456.2
GTEX-15ETS-3126-SM-6LPKN 40-49 years, female 1454.3
GTEX-1R9JW-0126-SM-EAZ4P 30-39 years, female 1450.3
GTEX-13FH7-1326-SM-5IFG8 50-59 years, female 1446.8
GTEX-1HSMQ-0126-SM-D4P2I 50-59 years, male 1444.9
GTEX-1S82Z-0126-SM-F2I21 30-39 years, female 1424.6
GTEX-146FQ-0626-SM-5LU9U 30-39 years, male 1422.9
GTEX-1QW4Y-0126-SM-DPRZQ 30-39 years, male 1409.6
GTEX-UPK5-1626-SM-4JBHI 40-49 years, male 1402.0
GTEX-1RNTQ-1026-SM-EV7B4 20-29 years, female 1401.6
GTEX-Y3IK-0126-SM-4WWE9 50-59 years, female 1397.3
GTEX-1CB4E-0126-SM-7DHMX 60-69 years, male 1389.9
GTEX-117YX-2126-SM-5GIEL 50-59 years, male 1388.1
GTEX-14ICL-0126-SM-664NG 30-39 years, male 1378.3
GTEX-1J8Q3-0126-SM-C1YSI 60-69 years, male 1377.2
GTEX-Z9EW-0726-SM-5HL9H 40-49 years, male 1371.6
GTEX-1L5NE-0926-SM-D4P3P 50-59 years, male 1368.6
GTEX-18A66-1826-SM-7KFSU 60-69 years, male 1344.1
GTEX-OOBJ-0926-SM-48TDO 60-69 years, male 1336.4
GTEX-14PN3-0226-SM-6871K 60-69 years, female 1328.8
GTEX-1LSNM-0126-SM-EAZ57 50-59 years, male 1324.4
GTEX-14JG6-0226-SM-6872A 30-39 years, female 1317.7
GTEX-14PJ5-0326-SM-664OD 60-69 years, female 1310.3
GTEX-13U4I-1626-SM-5IFFR 40-49 years, female 1300.6
GTEX-13VXT-1326-SM-5LU3Y 20-29 years, female 1290.2
GTEX-15UF7-1926-SM-6LPJT 40-49 years, male 1287.3
GTEX-ZPCL-0626-SM-DNZZ6 60-69 years, female 1287.2
GTEX-1QCLZ-1026-SM-E6CR1 60-69 years, female 1285.5
GTEX-P78B-1226-SM-EZ6KP 40-49 years, female 1283.9
GTEX-T5JW-0126-SM-4DM6K 20-29 years, female 1281.6
GTEX-1KXAM-0126-SM-HL9S2 60-69 years, male 1280.7
GTEX-15SB6-0126-SM-6LPJR 50-59 years, female 1276.5
GTEX-1QP29-0126-SM-EAZ3S 50-59 years, male 1272.0
GTEX-1RAZA-1026-SM-E6CQ9 20-29 years, male 1264.0
GTEX-XMK1-0126-SM-4B65F 40-49 years, male 1262.7
GTEX-1MGNQ-1126-SM-EAZ4Y 40-49 years, male 1261.6
GTEX-14E1K-0126-SM-664NL 50-59 years, male 1255.6
GTEX-WYJK-0726-SM-G8W7Z 50-59 years, male 1254.7
GTEX-14PJ6-0226-SM-6AJ9K 60-69 years, female 1226.3
GTEX-1JKYN-0326-SM-AHZ4D 30-39 years, male 1212.9
GTEX-PX3G-0926-SM-48U12 20-29 years, female 1208.7
GTEX-1IDJE-0126-SM-C1YQ6 50-59 years, female 1206.8
GTEX-11XUK-0426-SM-5EQML 40-49 years, female 1199.3
GTEX-1MCYP-0226-SM-EV7A3 20-29 years, female 1189.7
GTEX-1IDJC-0126-SM-C1YQC 50-59 years, male 1189.5
GTEX-R55G-0226-SM-48FEI 40-49 years, female 1182.3
GTEX-11VI4-0126-SM-5GU6Z 40-49 years, female 1181.8
GTEX-WYVS-0126-SM-4ONDH 40-49 years, female 1156.2
GTEX-1QCLY-0126-SM-DPRZV 30-39 years, male 1142.0
GTEX-1B97J-1926-SM-7IGQB 50-59 years, female 1139.8
GTEX-1HCU9-0126-SM-9WG7M 20-29 years, male 1136.2
GTEX-14PK6-0526-SM-69LOF 70-79 years, female 1133.4
GTEX-1RMOY-0726-SM-EV79D 50-59 years, male 1123.9
GTEX-1QP66-0126-SM-EAZ3N 50-59 years, male 1119.3
GTEX-Y114-0726-SM-4TT6U 50-59 years, female 1110.8
GTEX-NFK9-1426-SM-43ISG 40-49 years, male 1106.8
GTEX-1CB4I-1426-SM-79OLZ 50-59 years, male 1106.3
GTEX-11DXX-0726-SM-5H12X 60-69 years, female 1101.4
GTEX-ZEX8-0726-SM-4WKH8 50-59 years, male 1100.7
GTEX-14XAO-0126-SM-HAV2B 60-69 years, female 1100.0
GTEX-14PJ3-0326-SM-GPI94 50-59 years, male 1098.3
GTEX-1RAZQ-0126-SM-EV7B1 30-39 years, male 1098.3
GTEX-Q2AH-0226-SM-48U1I 40-49 years, male 1089.9
GTEX-1RB15-0126-SM-G9ERT 60-69 years, male 1084.5
GTEX-1R7EV-0126-SM-EAZ3O 40-49 years, male 1080.8
GTEX-XGQ4-0126-SM-4AT4H 50-59 years, male 1065.3
GTEX-1399R-0226-SM-5IJGG 30-39 years, male 1064.0
GTEX-ZVP2-0526-SM-51MSC 50-59 years, male 1056.1
GTEX-1GZ4H-0126-SM-9JGGI 50-59 years, female 1037.7
GTEX-1N2DV-0726-SM-HK7AD 40-49 years, male 1037.7
GTEX-1MJIX-0126-SM-HL9SS 40-49 years, male 1032.9
GTEX-146FR-1926-SM-5NQA6 60-69 years, female 1028.4
GTEX-12WSK-0126-SM-5GCO7 40-49 years, female 1022.2
GTEX-131XG-0426-SM-5IFGD 50-59 years, female 1021.0
GTEX-11P7K-0426-SM-5BC5H 30-39 years, male 1000.0
GTEX-1LGRB-0126-SM-CNNR6 50-59 years, female 989.6
GTEX-1J8QM-0926-SM-C1YQ9 60-69 years, female 980.8
GTEX-1NUQO-0426-SM-HK79G 20-29 years, female 965.0
GTEX-169BO-0126-SM-79OLS 50-59 years, male 962.7
GTEX-1MCC2-0826-SM-EV7AM 30-39 years, female 945.3
GTEX-16A39-0126-SM-H7OFU 30-39 years, female 934.7
GTEX-1RAZR-1626-SM-EAZ4V 40-49 years, male 921.1
GTEX-1AMFI-0926-SM-731E4 50-59 years, female 910.8
GTEX-1K2DA-0126-SM-CGQGV 50-59 years, male 901.0
GTEX-1H1E6-0226-SM-GA8YV 30-39 years, male 888.6
GTEX-15RIG-0126-SM-6PAN4 40-49 years, male 851.9
GTEX-1MJK3-0126-SM-DPRYY 20-29 years, male 850.9
GTEX-ZDYS-1026-SM-4WKHC 50-59 years, male 824.2
GTEX-1LG7Z-0126-SM-EV79V 30-39 years, male 819.8
GTEX-1B97I-0126-SM-731DH 40-49 years, male 816.3
GTEX-1A3MV-0126-SM-731FQ 30-39 years, male 812.7
GTEX-15CHC-0726-SM-6AJ9D 60-69 years, female 797.6
GTEX-XQ8I-1726-SM-4BOQB 50-59 years, male 797.3
GTEX-1B8KZ-0226-SM-7EWF6 50-59 years, male 785.9
GTEX-1C64O-1626-SM-731EN 60-69 years, male 771.3
GTEX-1GF9U-0126-SM-AHZ4G 40-49 years, female 744.7
GTEX-ZP4G-0326-SM-4YCEF 20-29 years, female 703.4
GTEX-1AYD5-0226-SM-79ONV 50-59 years, male 687.7
GTEX-15SDE-0126-SM-793BA 50-59 years, female 643.6
GTEX-16MT8-1826-SM-7EWE8 60-69 years, female 627.4
GTEX-111CU-0426-SM-5GZY1 50-59 years, male 600.5
GTEX-1PPH8-1126-SM-HL9SW 20-29 years, male 559.8
GTEX-1PWST-1626-SM-EXOIU 70-79 years, male 543.5
GTEX-131XE-1126-SM-5EGHW 50-59 years, male 541.0
GTEX-XXEK-0126-SM-4BRVU 50-59 years, male 526.9
GTEX-QDT8-1526-SM-EXOHP 30-39 years, female 490.4
GTEX-1N2EF-1526-SM-EXOIY 60-69 years, male 426.6
GTEX-W5X1-0326-SM-HAUYG 40-49 years, female 368.2
GTEX-12WSG-0926-SM-5EGIH 50-59 years, female 344.0
GTEX-1FIGZ-0126-SM-7MKGZ 40-49 years, male 286.0
GTEX-17F96-1426-SM-7IGQA 70-79 years, male 263.3
GTEX-1JMLX-1426-SM-CNNPO 50-59 years, male 263.3
GTEX-18A7A-1626-SM-HAV37 50-59 years, female 252.5
GTEX-1QAET-2326-SM-EXOJ1 50-59 years, male 222.6
GTEX-1LSVX-1426-SM-DHXJO 60-69 years, male 192.1
GTEX-1H3O1-1126-SM-9WPO9 60-69 years, male 187.2
GTEX-Y5V5-1126-SM-EVYAR 60-69 years, female 173.1
GTEX-15DYW-1426-SM-6LPIW 60-69 years, female 161.5
GTEX-17HII-2326-SM-GRR1X 50-59 years, male 156.6
GTEX-1C6VQ-2126-SM-7IGNL 50-59 years, male 153.5
GTEX-1R9K4-1526-SM-DPRY5 60-69 years, male 150.4
GTEX-X585-1826-SM-4QAS3 50-59 years, male 142.9
GTEX-ZTPG-2126-SM-H6Q6N 20-29 years, female 139.0
GTEX-1KD5A-1526-SM-D4P3W 50-59 years, male 137.7
GTEX-ZTTD-1726-SM-57WEL 50-59 years, male 135.4
GTEX-O5YV-0826-SM-HM8V9 60-69 years, female 133.1
GTEX-17F97-1626-SM-72D6W 50-59 years, male 123.8
GTEX-1K9T9-0626-SM-CXZKY 50-59 years, female 101.0
GTEX-1HCU7-1426-SM-CNNQK 50-59 years, male 98.4
GTEX-12WSD-1726-SM-5GCN4 60-69 years, female 84.8
GTEX-15CHQ-1226-SM-6ETZL 60-69 years, male 82.9
GTEX-1KAFJ-1026-SM-D4P2Z 50-59 years, male 82.3
GTEX-14PJO-2026-SM-GOQYV 60-69 years, male 78.2
GTEX-16MT9-1726-SM-6M47P 60-69 years, female 63.0
GTEX-QESD-0126-SM-EXOHG 20-29 years, male 50.8
GTEX-1PIIG-1226-SM-EXOIQ 30-39 years, male 50.3
GTEX-1JMQK-1126-SM-CXZJW 60-69 years, male 46.5
GTEX-18A6Q-2126-SM-HAV3C 60-69 years, male 42.8
GTEX-1QMI2-1526-SM-EXOJT 60-69 years, male 42.4
GTEX-1PPH7-0126-SM-E6CPB 40-49 years, male 39.3
GTEX-1LNCM-0426-SM-DHXK6 50-59 years, female 34.0
GTEX-1JMPZ-0926-SM-CXZJR 30-39 years, male 33.4
GTEX-15ER7-1526-SM-6LLHO 20-29 years, female 29.1
GTEX-111FC-1326-SM-5N9D9 60-69 years, male 28.5
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SPLEEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

5379.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spleen
Scaled Tags Per Million: 5379.5
FF:10025-101D7 39,50,70 years, male 5379.5

SPLEEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1791.6
Pig sample Sample description nTPM
Spleen
nTPM: 1791.6
Samples: 4

Max nTPM: 3148.1
Min nTPM: 992.1
Sample A Female 3148.1
Sample B Female 992.1
Sample C Male 1083.1
Sample D Male 1943.3

SPLEEN - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

246.9
Mouse sample Sample description nTPM
Spleen
nTPM: 247.0
Samples: 4

Max nTPM: 299.9
Min nTPM: 165.9
Sample C 165.9
Sample D 299.9
Sample A 274.9
Sample B 247.1

SPLEEN - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

333.6
Rat sample Sample description nTPM
Spleen
nTPM: 333.6
Samples: 4

Max nTPM: 388.4
Min nTPM: 280.7
Sample A 388.4
Sample A 298.4
Sample A 280.7
Sample A 366.8

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